Fish Single-cell RNA Database

GENE ID: ENSDARG00000059252

Symbol	Location	Gene type	Genome version	Species
zpcx	17: 25328351 ~ 25331447 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000059252 (zpcx), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000020749	caprin2	4: 16615026 ~ 16628802 (-)
ENSDARG00000016538	zgc:55888	4: 9467049 ~ 9476418 (+)
ENSDARG00000057328	cth1	7: 17947217 ~ 17950315 (+)
ENSDARG00000010332	zgc:56231	7: 58751504 ~ 58759890 (+)
ENSDARG00000034207	cx44.2	6: 21001264 ~ 21028431 (+)
ENSDARG00000039828	zp3b	2: 6253246 ~ 6258796 (+)
ENSDARG00000038720	zp3f.1	2: 38282647 ~ 38284749 (-)
ENSDARG00000086859	qdprb2	1: 24382651 ~ 24385979 (+)
ENSDARG00000034989	retsatl	9: 44994214 ~ 44998722 (+)
ENSDARG00000042129	zp3a.1	20: 33991801 ~ 33993698 (+)
ENSDARG00000069251	zpax1	20: 43737022 ~ 43743700 (-)
ENSDARG00000019706	zar1	20: 23423814 ~ 23426339 (-)
ENSDARG00000105346	zp2.2	20: 54290356 ~ 54292173 (+)
ENSDARG00000114237	bcl2l16	8: 52701811 ~ 52716316 (+)
ENSDARG00000059252	zpcx	17: 25328351 ~ 25331447 (-)
ENSDARG00000114958	zp3	17: 2580541 ~ 2584423 (-)
ENSDARG00000041145	paqr5a	18: 20459888 ~ 20466061 (-)
ENSDARG00000073787	si:ch73-303b9.1	11: 1547226 ~ 1550709 (-)
ENSDARG00000070714	zgc:173544	11: 16014527 ~ 16021522 (-)
ENSDARG00000095281	zgc:152652	24: 9981933 ~ 9991286 (-)
ENSDARG00000092885	zgc:171977	24: 9976212 ~ 9985019 (-)
ENSDARG00000078638	zgc:171750	24: 10003426 ~ 10006158 (-)
ENSDARG00000016825	vtg6	22: 24811396 ~ 24818066 (-)
ENSDARG00000078429	vtg4	22: 24784013 ~ 24791505 (-)
ENSDARG00000092419	vtg7	22: 24851227 ~ 24858050 (-)
ENSDARG00000087583	zgc:171717	22: 25289360 ~ 25290573 (+)
ENSDARG00000088713	si:ch211-226h8.14	22: 25335320 ~ 25337183 (+)
ENSDARG00000055809	vtg2	22: 24869690 ~ 24880824 (-)
ENSDARG00000053246	depdc7b	25: 5972690 ~ 5982502 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA706197 (12hpf)	embryo	baseline	12hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (14hpf)	embryo	baseline	14hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000059252

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences