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| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| rnasel3 | 14: 38654300 ~ 38656463 (+) | protein_coding | GRCz11 | Danio rerio |
: marker.| Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
|---|---|---|---|---|---|---|---|
| PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development |
Hepatocytes (cluster: 20) |
potential marker |
NA |
|
| GSE137784 (HCC, HepABC) | liver | disease | 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC |
Hepatocytes (cluster: 2) |
potential marker |
NA |
|
| GSE137784 (no HCC) | liver | baseline | 6mpf, male, isolated from the CreLox zebrafish with HCC |
Hepatocytes (cluster: 1) |
potential marker |
NA |
|
| PRJNA415636 (primary pancreatic islet) | primary pancreatic islet | baseline | adult, Zebrabow M, primary pancreatic islet |
Pancreas duct epithelial cells (cluster: 7) |
potential marker |
NA |
|
| PRJNA641144 (M_PRO) | tumor | disease | adult, ZMEL1-PRO cells in vivo metastases |
Melanoma cells (cluster: 8) |
potential marker |
NA |
|
| GSE158142 (15dpf) | brain, eye | baseline | 15dpf, untreatment | NA | NA | NA | |
| GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos | NA | NA | NA | |
| PRJNA640816 (2.9dpf) | embryo | baseline | 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells | NA | NA | NA | |
| PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
| PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
| GSE161712 (M. marinum) | granulomas | disease | adult, infected with bacteria of M. marinum | NA | NA | NA | |
| PRJNA415636 (pancreas, liver) | hepatopancreas | baseline | adult, Zebrabow M, pancreas and liver | NA | NA | NA | |
| GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | NA | NA | NA | |
| GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | NA | NA | NA | |
| GSE150498 (wildtype, untreated) | intestine | baseline | 6dpf, wildtype, untreated | NA | NA | NA | |
| GSE150498 (nod2-|-, untreated) | intestine | disease | 6dpf, nod2-/-, untreated | NA | NA | NA | |
| GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | NA | NA | NA | |
| GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | NA | NA | NA | |
| GSE150498 (wildtype, 2X DSS) | intestine | disease | 6dpf, wildtype, 2X DSS | NA | NA | NA | |
| GSE150498 (wildtype, 2X DSS+BZA) | intestine | disease | 6dpf, wildtype, 2X DSS+BZA | NA | NA | NA | |
| GSE150498 (nod2-|-, 2X DSS) | intestine | disease | 6dpf, nod2-/-, 2X DSS | NA | NA | NA | |
| GSE150498 (nod2-|-, 2X DSS+BZA) | intestine | disease | 6dpf, nod2-/-, 2X DSS+BZA | NA | NA | NA | |
| GSE137784 (HCC, CreLox) | liver | disease | 6mpf, male, isolated from the zebrafish without HCC | NA | NA | NA | |
| GSE123241 (fgf3 mutants) | neuromast | regeneration | 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory | NA | NA | NA | |
| PRJNA668529 (3h) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 hours | NA | NA | NA | |
| PRJNA668529 (control) | olfactory rosette | baseline | 3mpf, intranasal PBS | NA | NA | NA | |
| GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | NA | NA | NA | |
| GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | NA | NA | NA | |
| GSE159709 (melanoma) | tumor | disease | adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells | NA | NA | NA | |
| PRJNA641144 (M_INV) | tumor | disease | adult, ZMEL1-INV cells in vivo metastases | NA | NA | NA | |
| GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | NA | NA | NA |