Fish Single-cell RNA Database

GENE ID: ENSDARG00000002764

Symbol	Location	Gene type	Genome version	Species
miox	18: 6732195 ~ 6742287 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000002764 (miox), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000104108	slco1d1	4: 77389668 ~ 77432218 (-)
ENSDARG00000077570	cdh16	7: 44857271 ~ 44957503 (-)
ENSDARG00000004130	mvk	5: 19494198 ~ 19509695 (+)
ENSDARG00000063126	gusb	5: 2066262 ~ 2112030 (-)
ENSDARG00000035257	akr1a1a	5: 41521043 ~ 41531629 (-)
ENSDARG00000035388	tmem174	5: 35105085 ~ 35108893 (-)
ENSDARG00000054842	hsd17b14	3: 29969143 ~ 29977495 (-)
ENSDARG00000070686	cdipt	3: 21125293 ~ 21137362 (-)
ENSDARG00000052030	akr1a1b	6: 33918813 ~ 33925432 (-)
ENSDARG00000003517	impa1	2: 26682913 ~ 26688908 (+)
ENSDARG00000002745	tdh	20: 18992679 ~ 18998022 (+)
ENSDARG00000021172	cyp2ad2	20: 25534669 ~ 25542183 (-)
ENSDARG00000063635	nrxn1b	13: 733027 ~ 811276 (+)
ENSDARG00000019081	NA	18: 951092 ~ 968706 (-)
ENSDARG00000028336	dhdhl	18: 970246 ~ 977075 (-)
ENSDARG00000063157	mapk8ip2	18: 8255265 ~ 8313686 (-)
ENSDARG00000063167	chkb	18: 8320165 ~ 8338946 (+)
ENSDARG00000002764	miox	18: 6732195 ~ 6742287 (-)
ENSDARG00000078875	adm2b	18: 6753677 ~ 6766354 (-)
ENSDARG00000031968	cpped1	12: 19866865 ~ 19932623 (+)
ENSDARG00000069409	gkup	15: 21262917 ~ 21275683 (+)
ENSDARG00000002523	hsdl2	10: 11260170 ~ 11283239 (+)
ENSDARG00000079862	kl	10: 34001444 ~ 34026125 (+)
ENSDARG00000059411	impa2	24: 792429 ~ 799026 (+)
ENSDARG00000097155	NA	25: 8623709 ~ 8625601 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Hepatocytes (cluster: 20)	potential marker	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	Hepatocytes (cluster: 9)	potential marker	NA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC	Hepatocytes (cluster: 1)	potential marker	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000002764

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences