Fish Single-cell RNA Database

GENE ID: ENSDARG00000079064

Symbol	Location	Gene type	Genome version	Species
CABZ01079080.1	15: 47100392 ~ 47107557 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000079064 (CABZ01079080.1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000060070	adcy7	7: 37761524 ~ 37858666 (-)
ENSDARG00000018329	gc2	7: 51267478 ~ 51300277 (-)
ENSDARG00000026820	gucy2d	5: 38123633 ~ 38161033 (-)
ENSDARG00000014320	gucy2c	3: 3765831 ~ 3798755 (-)
ENSDARG00000013787	gucy1a1	1: 25783801 ~ 25799051 (+)
ENSDARG00000086790	gucy1b1	1: 25801648 ~ 25841659 (+)
ENSDARG00000018750	npr1b	16: 28908478 ~ 28991376 (+)
ENSDARG00000077145	adcy3a	16: 2515223 ~ 2558653 (-)
ENSDARG00000058392	adcy2a	16: 9275689 ~ 9383629 (-)
ENSDARG00000093267	cngk	13: 7477500 ~ 7524090 (+)
ENSDARG00000087941	pde8a	18: 14710 ~ 33344 (-)
ENSDARG00000056045	si:ch73-139e5.4	12: 19065679 ~ 19091214 (-)
ENSDARG00000076776	gucy2g	12: 31460877 ~ 31476114 (+)
ENSDARG00000031751	npr1a	19: 26423590 ~ 26629117 (+)
ENSDARG00000014588	adcy2b	19: 27608927 ~ 27777228 (-)
ENSDARG00000025504	gucy2f	15: 29362714 ~ 29381134 (+)
ENSDARG00000079064	CABZ01079080.1	15: 47100392 ~ 47107557 (-)
ENSDARG00000093185	NA	15: 44366556 ~ 44404098 (+)
ENSDARG00000056591	gucy1b2	11: 29739348 ~ 29755142 (+)
ENSDARG00000101868	dennd1b	22: 23359369 ~ 23479989 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000079064

EXPRESSION

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