Fish Single-cell RNA Database

GENE ID: ENSDARG00000018329

Symbol	Location	Gene type	Genome version	Species
gc2	7: 51267478 ~ 51300277 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000018329 (gc2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000010454	guca1a	4: 22343093 ~ 22350976 (+)
ENSDARG00000051915	pde5ab	7: 57539146 ~ 57619470 (+)
ENSDARG00000018329	gc2	7: 51267478 ~ 51300277 (-)
ENSDARG00000026820	gucy2d	5: 38123633 ~ 38161033 (-)
ENSDARG00000052223	rcvrna	3: 50441444 ~ 50443607 (-)
ENSDARG00000058803	grk1a	1: 245076 ~ 258138 (+)
ENSDARG00000075929	si:dkey-219c10.4	9: 38140911 ~ 38156894 (-)
ENSDARG00000060280	pde9a	9: 19421841 ~ 19477248 (+)
ENSDARG00000006151	pde11al	16: 21144669 ~ 21185778 (-)
ENSDARG00000019902	rcvrn2	16: 13911692 ~ 13921589 (-)
ENSDARG00000000380	pde6a	14: 25005403 ~ 25035010 (-)
ENSDARG00000003449	pde10a	13: 4505079 ~ 4620715 (+)
ENSDARG00000068242	cngb1a	18: 45483282 ~ 45519748 (+)
ENSDARG00000100397	pde6c	12: 5129245 ~ 5154099 (+)
ENSDARG00000025504	gucy2f	15: 29362714 ~ 29381134 (+)
ENSDARG00000076650	pde9al	15: 22333778 ~ 22348626 (+)
ENSDARG00000079064	CABZ01079080.1	15: 47100392 ~ 47107557 (-)
ENSDARG00000030758	guca1c	15: 2884711 ~ 2903475 (-)
ENSDARG00000013393	guca1b	23: 19227296 ~ 19230627 (-)
ENSDARG00000012125	cnga1b	23: 43849190 ~ 43866354 (+)
ENSDARG00000044629	guca1d	21: 22906479 ~ 22910530 (-)
ENSDARG00000011671	pde6b	21: 20356458 ~ 20376607 (+)
ENSDARG00000070666	rhol	11: 19095431 ~ 19097746 (-)
ENSDARG00000101567	guca1e	22: 1092479 ~ 1109547 (+)
ENSDARG00000042107	cngb1b	25: 17508235 ~ 17552299 (-)
--	pde6g	--
--	si:ch211-103a14.5	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	Rod opsin (cluster: 11)	potential marker	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000018329

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences