Fish Single-cell RNA Database

GENE ID: ENSDARG00000089563

Symbol	Location	Gene type	Genome version	Species
sfrp2l	15: 47811725 ~ 47822597 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000089563 (sfrp2l), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000022858	wnt7ba	4: 18702129 ~ 18713979 (+)
ENSDARG00000004256	wnt11f2	5: 36513605 ~ 36520117 (+)
ENSDARG00000037889	wnt9b	3: 37574885 ~ 37581620 (+)
ENSDARG00000038283	wnt6a	6: 13726844 ~ 13734490 (+)
ENSDARG00000005050	wnt2ba	6: 48253449 ~ 48271687 (+)
ENSDARG00000073935	wnt6b	9: 11281969 ~ 11341315 (+)
ENSDARG00000017155	wnt10a	9: 11379782 ~ 11409691 (+)
ENSDARG00000040159	wnt4b	16: 31802203 ~ 31813018 (+)
ENSDARG00000078507	wnt8a	14: 34495216 ~ 34497724 (+)
ENSDARG00000006911	wnt8b	13: 29991090 ~ 30006260 (-)
ENSDARG00000041117	wnt2	18: 20613241 ~ 20636549 (-)
ENSDARG00000089563	sfrp2l	15: 47811725 ~ 47822597 (-)
ENSDARG00000002483	wnt7ab	23: 4414164 ~ 4433220 (+)
ENSDARG00000014796	wnt11	10: 32104305 ~ 32123204 (+)
ENSDARG00000071107	wnt7bb	25: 2002715 ~ 2081371 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000089563

EXPRESSION

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