|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
PRJNA554650 (6.5dpf) |
brain |
baseline |
6.5dpf, whole brain of nr1d1:VNP fish |
NA |
NA |
NA |
|
GSE158142 (5dpf) |
brain, eye |
baseline |
5dpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (8dpf) |
brain, eye |
baseline |
8dpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (15dpf) |
brain, eye |
baseline |
15dpf, untreatment |
NA |
NA |
NA |
|
GSE158849 (unlabeled) |
embryo |
baseline |
6hpf, WT, 4sUTP injected (unlabeled) |
NA |
NA |
NA |
|
PRJNA734348 (dome, control) |
embryo |
baseline |
4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) |
NA |
NA |
NA |
|
PRJNA734348 (dome, dnmt1) |
embryo |
growth |
4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) |
NA |
NA |
NA |
|
PRJNA656271 (2dpf) |
embryo |
baseline |
2dpf, FACS-isolated EGFP+ cells |
NA |
NA |
NA |
|
GSE168695 (5dpf) |
embryo |
baseline |
5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos |
NA |
NA |
NA |
|
PRJNA564810 (2dpf) |
embryo |
baseline |
2dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
GSE158142 (1.5dpf) |
head |
baseline |
1.5dpf, untreatment |
NA |
NA |
NA |
|
PRJNA415636 (pancreas, liver) |
hepatopancreas |
baseline |
adult, Zebrabow M, pancreas and liver |
NA |
NA |
NA |
|
PRJNA754013 (zebrafish) |
hypothalamus |
baseline |
adult, male, female, untreatment |
NA |
NA |
NA |
|
GSE150498 (wildtype, untreated) |
intestine |
baseline |
6dpf, wildtype, untreated |
NA |
NA |
NA |
|
PRJNA668529 (3d) |
olfactory rosette |
disease |
3mpf, intranasal 100ng r-Spike 3 days |
NA |
NA |
NA |
|
PRJNA668529 (3h) |
olfactory rosette |
disease |
3mpf, intranasal 100ng r-Spike 3 hours |
NA |
NA |
NA |
|
GSE148591 (6mpf) |
pituitary |
baseline |
6mpf, male, Sox17:CreERT2 |
NA |
NA |
NA |
|
PRJNA415636 (primary pancreatic islet) |
primary pancreatic islet |
baseline |
adult, Zebrabow M, primary pancreatic islet |
NA |
NA |
NA |
|
GSE122680 (2dpf) |
retina |
baseline |
2dpf, WT, untreatment |
NA |
NA |
NA |
|
PRJNA672101 (nrl-KO) |
retina |
growth |
5mpf, three retinas from nrl-KO zebrafsih |
NA |
NA |
NA |
|
PRJNA672101 (WT) |
retina |
baseline |
5mpf, three retinas from WT zebrafsih |
NA |
NA |
NA |
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
NA |
NA |
NA |
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
NA |
NA |
NA |
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |