Fish Single-cell RNA Database

GENE ID: ENSDARG00000078245

Symbol	Location	Gene type	Genome version	Species
gal3st1b	10: 1722125 ~ 1733937 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000078245 (gal3st1b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000062711	gal3st1a	5: 12888260 ~ 12906542 (+)
ENSDARG00000035198	gcnt4a	5: 51026563 ~ 51030105 (+)
ENSDARG00000022772	NA	5: 24571750 ~ 24712405 (-)
ENSDARG00000055160	chadla	3: 25108968 ~ 25119839 (-)
ENSDARG00000004634	osbp	1: 52662203 ~ 52699063 (+)
ENSDARG00000037455	ugt8	1: 20556067 ~ 20593778 (-)
ENSDARG00000037064	galca	20: 4769762 ~ 4793450 (-)
ENSDARG00000016474	galcb	17: 18889637 ~ 18898115 (-)
ENSDARG00000036155	gla	14: 38932441 ~ 38946808 (-)
ENSDARG00000075903	chadlb	12: 18989486 ~ 19007834 (-)
ENSDARG00000008832	neu1	19: 26810208 ~ 26823709 (-)
ENSDARG00000057677	neu4	15: 2490204 ~ 2497568 (-)
ENSDARG00000096382	neu3.1	21: 21791343 ~ 21794771 (+)
ENSDARG00000058327	neu3.3	21: 21803363 ~ 21809107 (+)
ENSDARG00000096381	neu3.4	21: 21811867 ~ 21813776 (+)
ENSDARG00000096368	neu3.5	21: 21817975 ~ 21819321 (+)
ENSDARG00000075625	lrig1	11: 16329776 ~ 16395956 (-)
ENSDARG00000078245	gal3st1b	10: 1722125 ~ 1733937 (-)
ENSDARG00000053487	osbp2	10: 7916720 ~ 7974155 (-)
ENSDARG00000100642	plppr1	10: 4235998 ~ 4259274 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000078245

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences