Fish Single-cell RNA Database

GENE ID: ENSDARG00000027169

Symbol	Location	Gene type	Genome version	Species
kpna7	10: 25214270 ~ 25217347 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000027169 (kpna7), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000057328	cth1	7: 17947217 ~ 17950315 (+)
ENSDARG00000010332	zgc:56231	7: 58751504 ~ 58759890 (+)
ENSDARG00000035171	btg4	5: 57924611 ~ 57926693 (+)
ENSDARG00000102892	h1m	5: 68326858 ~ 68333081 (-)
ENSDARG00000038905	hectd3	2: 26479676 ~ 26495044 (+)
ENSDARG00000089225	ro60	2: 11923615 ~ 11945936 (+)
ENSDARG00000042063	si:ch211-145c1.1	9: 8288268 ~ 8314028 (-)
ENSDARG00000093125	NA	9: 70157 ~ 94601 (+)
ENSDARG00000087530	wu:fe05a04	16: 25171832 ~ 25181542 (+)
ENSDARG00000037158	rcc1	16: 34185613 ~ 34195002 (-)
ENSDARG00000015907	dcbld1	20: 42296256 ~ 42378994 (-)
ENSDARG00000105346	zp2.2	20: 54290356 ~ 54292173 (+)
ENSDARG00000078917	zgc:195245	8: 23776570 ~ 23780402 (-)
ENSDARG00000056531	nutf2	18: 21913685 ~ 21929451 (-)
ENSDARG00000055250	cntd2	18: 40698550 ~ 40708537 (-)
ENSDARG00000040510	ca15b	12: 4294923 ~ 4301376 (-)
ENSDARG00000104889	kpnb1	19: 48024457 ~ 48037702 (+)
ENSDARG00000099972	nup153	19: 46019313 ~ 46058963 (-)
ENSDARG00000078654	tpx2	23: 32028574 ~ 32039790 (+)
ENSDARG00000025386	lsm14b	23: 553396 ~ 567183 (+)
ENSDARG00000055655	birc5b	23: 28322986 ~ 28325846 (+)
ENSDARG00000006580	cldnd	21: 25777425 ~ 25778201 (+)
ENSDARG00000069428	slbp2	21: 30288570 ~ 30293586 (-)
ENSDARG00000025174	zgc:103482	21: 20396858 ~ 20402686 (+)
ENSDARG00000006963	cse1l	11: 5468629 ~ 5493191 (+)
ENSDARG00000055973	zar1l	10: 33999869 ~ 34002185 (-)
ENSDARG00000027169	kpna7	10: 25214270 ~ 25217347 (-)
ENSDARG00000053963	npm2b	10: 44552548 ~ 44560302 (-)
ENSDARG00000071583	gtf3ab	24: 21640635 ~ 21642858 (+)
ENSDARG00000092885	zgc:171977	24: 9976212 ~ 9985019 (-)
ENSDARG00000088923	si:ch211-12h2.8	22: 25611415 ~ 25612680 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry	NA	NA	NA
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000027169

EXPRESSION

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