|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
GSE161712 (M. marinum) |
granulomas |
disease |
adult, infected with bacteria of M. marinum |
Eosinophils (cluster: 16)
|
potential marker
|
NA
|
|
PRJNA608912 (wt_2dpi) |
heart |
regeneration |
5mpf, wild type, 2 days post injury |
|
|
|
|
PRJNA608912 (kit_14dpi) |
heart |
regeneration |
5mpf, kit mutant, 14 days post injury |
Neutrophils (cluster: 15)
|
potential marker
|
NA
|
|
GSE159709 (melanoma) |
tumor |
disease |
adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells |
Neutrophils (cluster: 7)
|
potential marker
|
NA
|
|
PRJNA554650 (6.5dpf) |
brain |
baseline |
6.5dpf, whole brain of nr1d1:VNP fish |
|
|
|
|
GSE158142 (8dpf) |
brain, eye |
baseline |
8dpf, untreatment |
|
|
|
|
GSE144944 (fgfr3 +|+) |
cranial vault |
baseline |
1mpf, fgfr3 +/+ |
|
|
|
|
GSE158849 (unlabeled) |
embryo |
baseline |
6hpf, WT, 4sUTP injected (unlabeled) |
|
|
|
|
GSE168695 (5dpf) |
embryo |
baseline |
5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos |
|
|
|
|
GSE158142 (20hpf) |
head |
baseline |
20hpf, 21-22 somites, untreatment |
|
|
|
|
PRJNA608912 (wt_unjuried) |
heart |
baseline |
5mpf, wild type, uninjured |
|
|
|
|
PRJNA608912 (wt_7dpi) |
heart |
regeneration |
5mpf, wild type, 7 days post injury |
|
|
|
|
PRJNA608912 (kit_uninjuried) |
heart |
regeneration |
5mpf, kit mutant, uninjured |
|
|
|
|
PRJNA608912 (kit_2dpi) |
heart |
regeneration |
5mpf, kit mutant, 2 days post injury |
|
|
|
|
PRJNA608912 (kit_7dpi) |
heart |
regeneration |
5mpf, kit mutant, 7 days post injury |
|
|
|
|
GSE137784 (HCC, HepABC) |
liver |
disease |
6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC |
|
|
|
|
GSE137784 (no HCC) |
liver |
baseline |
6mpf, male, isolated from the CreLox zebrafish with HCC |
|
|
|
|
PRJNA605021 (supporting cells) |
neuromast |
baseline |
7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae |
|
|
|
|
PRJNA605021 (hair cells) |
neuromast |
baseline |
7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae |
|
|
|
|
PRJNA668529 (3d) |
olfactory rosette |
disease |
3mpf, intranasal 100ng r-Spike 3 days |
|
|
|
|
PRJNA668529 (3h) |
olfactory rosette |
disease |
3mpf, intranasal 100ng r-Spike 3 hours |
|
|
|
|
PRJNA551501 (2mpf) |
thyroid gland |
baseline |
2mpf, Tg(tg:mVenus-T2A-NTR) |
|
|
|
|
PRJNA551501 (8mpf) |
thyroid gland |
baseline |
8mpf, Tg(tg:mVenus-T2A-NTR) |
|
|
|
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
|
|
|
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
6dpf, cd41:GFPlow-runx1-/- |
|
|
|
|
GSE158099 (WT) |
whole body |
baseline |
10dpf, cd41:GFPlow-WT |
|
|
|
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
|
|
|
: marker.