Fish Single-cell RNA Database

GENE ID: ENSDARG00000076510

Symbol	Location	Gene type	Genome version	Species
fgf22	22: 19111444 ~ 19156332 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000076510 (fgf22), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045854	fgf23	4: 5193198 ~ 5195027 (+)
ENSDARG00000104111	mrps30	5: 52971425 ~ 53004052 (-)
ENSDARG00000053845	cbln14	2: 37959040 ~ 37960688 (-)
ENSDARG00000038056	fgfbp2b	1: 22685961 ~ 22691182 (-)
ENSDARG00000056133	kitb	1: 19473028 ~ 19502378 (-)
ENSDARG00000070494	pdgfra	20: 22435180 ~ 22476255 (-)
ENSDARG00000102778	fgf17	8: 52732107 ~ 52745168 (-)
ENSDARG00000078518	kazald2	14: 5804928 ~ 5817039 (-)
ENSDARG00000102986	csf1ra	14: 3143337 ~ 3180947 (-)
ENSDARG00000074071	mrnip	14: 16765791 ~ 16775249 (-)
ENSDARG00000058115	fgfr2	13: 46298560 ~ 46429433 (-)
ENSDARG00000053624	csf1rb	21: 43854594 ~ 43877428 (+)
ENSDARG00000011190	fgfr1b	10: 42589391 ~ 42661445 (+)
ENSDARG00000079862	kl	10: 34001444 ~ 34026125 (+)
ENSDARG00000058503	flt3	24: 21691939 ~ 21713883 (-)
ENSDARG00000061665	hcn2b	22: 18951096 ~ 19007968 (+)
ENSDARG00000076510	fgf22	22: 19111444 ~ 19156332 (+)
ENSDARG00000092788	si:dkey-21e2.15	22: 19289970 ~ 19291261 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Epidermal cells (cluster: 9)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000076510

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences