Fish Single-cell RNA Database

GENE ID: --

Symbol	Location	Gene type	Genome version	Species
dnaja2	--	--	--	Danio rerio

PPI (protein-protein interaction) results are shown above.

Green is -- (dnaja2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000070477	dnajc2	4: 1766333 ~ 1785120 (-)
ENSDARG00000019861	fgl2a	4: 20178694 ~ 20181964 (-)
ENSDARG00000004906	stip1	5: 66807179 ~ 66823794 (-)
ENSDARG00000021924	hsp70.3	3: 26123736 ~ 26127091 (+)
ENSDARG00000092362	hsp70.2	3: 26119603 ~ 26122353 (-)
ENSDARG00000029688	hsp70.1	3: 26112780 ~ 26115559 (-)
ENSDARG00000099383	dnajb1a	3: 49150822 ~ 49163683 (-)
ENSDARG00000056167	hspe1	9: 32301017 ~ 32305007 (+)
ENSDARG00000028541	si:ch211-121a2.4	20: 7122527 ~ 7133546 (-)
ENSDARG00000024746	hsp90aa1.2	20: 53967350 ~ 53981626 (-)
ENSDARG00000056210	hspa1b	8: 24968098 ~ 24970790 (-)
ENSDARG00000055723	hsp70l	8: 4798158 ~ 4800911 (+)
ENSDARG00000053544	hspa4l	17: 43430365 ~ 43466317 (-)
ENSDARG00000018989	hspa4b	14: 23687678 ~ 23708159 (+)
ENSDARG00000041921	hsbp1b	18: 14334123 ~ 14337458 (-)
ENSDARG00000075984	hsbp1l1	19: 11429263 ~ 11431278 (-)
ENSDARG00000040984	hspa13	15: 29549115 ~ 29556757 (-)
ENSDARG00000037403	hspa8b	15: 19661498 ~ 19677511 (-)
ENSDARG00000012381	hsc70	15: 37834594 ~ 37850969 (-)
ENSDARG00000056338	szrd1	23: 24501918 ~ 24508821 (+)
ENSDARG00000004754	hspa4a	21: 43137500 ~ 43171249 (-)
ENSDARG00000019941	sgta	11: 14771908 ~ 14813063 (-)
ENSDARG00000016769	sgtb	10: 15381972 ~ 15405564 (-)
ENSDARG00000068992	hspa8	10: 29849497 ~ 29858018 (+)
ENSDARG00000092927	si:dkey-44g23.2	22: 26804197 ~ 26806216 (+)
ENSDARG00000054858	tp53bp2b	22: 28803739 ~ 28849279 (+)
--	dnaja2	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	Melanophores (cluster: 6)	potential marker	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE158142 (2dpf)	head	baseline	2dpf, untreatment
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
GSE158142 (24hpf)	head	baseline	24hpf, untreatment
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 siblings)	neuromast	regeneration	5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: --

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences