Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
esd | 9: 25171662 ~ 25181697 (-) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000053405 | sord | 7: 30923283 ~ 30926030 (-) |
ENSDARG00000025338 | hagh | 3: 18774511 ~ 18792534 (-) |
ENSDARG00000015310 | pitpnbl | 3: 15332268 ~ 15352438 (-) |
ENSDARG00000014945 | znf598 | 3: 40185253 ~ 40202607 (-) |
ENSDARG00000056481 | vat1 | 3: 19914332 ~ 19971774 (+) |
ENSDARG00000022599 | dnpep | 6: 13896264 ~ 13920394 (+) |
ENSDARG00000013561 | pgm1 | 6: 32010183 ~ 32025225 (-) |
ENSDARG00000020031 | cldn11a | 2: 25997426 ~ 26001173 (-) |
ENSDARG00000025350 | prdx2 | 1: 51721851 ~ 51729862 (+) |
ENSDARG00000019986 | grhprb | 1: 19835803 ~ 19845539 (-) |
ENSDARG00000019496 | esd | 9: 25171662 ~ 25181697 (-) |
ENSDARG00000029259 | zgc:136493 | 16: 25394763 ~ 25400257 (-) |
ENSDARG00000016745 | slc35f6 | 20: 25904199 ~ 25910643 (+) |
ENSDARG00000052606 | dpp9 | 8: 47677208 ~ 47723544 (+) |
ENSDARG00000060745 | pgm5 | 8: 30456161 ~ 30494617 (+) |
ENSDARG00000060008 | hhipl2 | 17: 45501378 ~ 45525936 (-) |
ENSDARG00000044090 | zmpste24 | 17: 24604373 ~ 24613061 (+) |
ENSDARG00000062501 | hhipl1 | 17: 17939095 ~ 17948587 (-) |
ENSDARG00000071021 | papss2a | 17: 23681086 ~ 23709347 (-) |
ENSDARG00000080010 | adh5 | 14: 43590816 ~ 43602968 (-) |
ENSDARG00000068264 | grhpra | 14: 44777478 ~ 44790817 (-) |
ENSDARG00000087262 | zgc:63568 | 14: 35892802 ~ 35900420 (+) |
ENSDARG00000088366 | zgc:77938 | 14: 35901249 ~ 35911982 (+) |
ENSDARG00000071871 | glod5 | 14: 11395383 ~ 11399574 (+) |
ENSDARG00000024278 | adh8b | 13: 12633223 ~ 12646752 (-) |
ENSDARG00000091211 | adh8a | 13: 12653975 ~ 12660318 (-) |
ENSDARG00000002071 | adss2 | 13: 11489953 ~ 11536951 (-) |
ENSDARG00000068978 | glo1 | 13: 44788077 ~ 44808783 (-) |
ENSDARG00000007180 | slc30a4 | 18: 5510251 ~ 5541784 (+) |
ENSDARG00000060927 | si:ch211-136a13.1 | 18: 49225552 ~ 49247479 (+) |
ENSDARG00000041595 | ces3 | 18: 17418254 ~ 17426306 (+) |
ENSDARG00000071251 | ppp1r18 | 19: 823945 ~ 840530 (+) |
ENSDARG00000093931 | rflnb | 15: 25093291 ~ 25099679 (-) |
ENSDARG00000014704 | pgm2l1 | 15: 5116179 ~ 5148793 (+) |
ENSDARG00000015343 | pgd | 23: 29381441 ~ 29394505 (-) |
ENSDARG00000043848 | sod1 | 10: 25694395 ~ 25699454 (-) |
ENSDARG00000036005 | pitpnb | 10: 4046448 ~ 4085216 (+) |
ENSDARG00000030723 | cldn11b | 24: 26432541 ~ 26441318 (+) |
ENSDARG00000032640 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE159709 (Visium-sample A) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838131
|
GSE159709 | |
GSE159709 (Visium-sample B) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838132
|
GSE159709 | |
GSE159709 (Visium-sample C) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838133
|
GSE159709 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE115140 (cancer) | tumor | ST | cancer | adult, the ST sample sections from zebrafish melanoma tumors were obtained by sectioning the entire tumor with its surrounding | GSM3167486
|
GSE115140 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate2) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812176
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 | |
GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate1) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788518
|
GSE104057 | |
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE104057 (heart replicate3) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788520
|
GSE104057 | |
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 | |
cvab004 (S2) | heart | baseline | late embryo, 1.08dpf, untreatment | S2 | cvab004 | |
cvab004 (S3) | heart | baseline | late embryo, 1.08dpf, untreatment | S3 | cvab004 | |
cvab004 (S4) | heart | baseline | late embryo, 1.08dpf, untreatment | S4 | cvab004 | |
cvab004 (S5) | heart | baseline | late embryo, 1.08dpf, untreatment | S5 | cvab004 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE74652 (3 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury | GSM1924887
|
GSE74652 | |
GSE74652 (7 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury | GSM1924888
|
GSE74652 |