Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
dct | 9: 53327332 ~ 53352682 (+) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000086393 | dbx1a | 7: 17024602 ~ 17028015 (-) |
ENSDARG00000053559 | tspan3b | 7: 30075245 ~ 30082931 (-) |
ENSDARG00000029204 | tyrp1a | 7: 74084203 ~ 74090168 (-) |
ENSDARG00000093957 | si:dkey-251i10.2 | 5: 67463027 ~ 67471375 (-) |
ENSDARG00000063288 | slc2a11b | 5: 10014604 ~ 10046183 (+) |
ENSDARG00000077467 | sox10 | 3: 1492174 ~ 1501255 (+) |
ENSDARG00000056481 | vat1 | 3: 19914332 ~ 19971774 (+) |
ENSDARG00000070991 | mlpha | 6: 15604759 ~ 15641686 (-) |
ENSDARG00000003732 | mitfa | 6: 43390387 ~ 43433277 (+) |
ENSDARG00000021032 | foxd3 | 6: 32092032 ~ 32093830 (-) |
ENSDARG00000077858 | asip1 | 6: 49975910 ~ 49983329 (-) |
ENSDARG00000061303 | oca2 | 6: 37894220 ~ 38054851 (+) |
ENSDARG00000010192 | pax3a | 2: 47370323 ~ 47431205 (-) |
ENSDARG00000056151 | tyrp1b | 1: 19332837 ~ 19346048 (+) |
ENSDARG00000053269 | slc2a15b | 1: 31573225 ~ 31598417 (+) |
ENSDARG00000089334 | ednrba | 1: 28624186 ~ 28629471 (-) |
ENSDARG00000006008 | dct | 9: 53327332 ~ 53352682 (+) |
ENSDARG00000062481 | mlphb | 9: 24008879 ~ 24023369 (+) |
ENSDARG00000009018 | rhbg | 16: 29265796 ~ 29277164 (-) |
ENSDARG00000055240 | xdh | 17: 33340675 ~ 33374538 (+) |
ENSDARG00000024771 | slc24a5 | 18: 5213338 ~ 5227420 (+) |
ENSDARG00000020237 | mc1r | 18: 31226288 ~ 31227615 (-) |
ENSDARG00000011076 | zgc:91968 | 19: 4990320 ~ 4999232 (+) |
ENSDARG00000062688 | gpnmb | 19: 20247435 ~ 20270207 (-) |
ENSDARG00000031348 | mc5ra | 19: 12762887 ~ 12803408 (+) |
ENSDARG00000039077 | tyr | 15: 43799258 ~ 43818697 (+) |
ENSDARG00000058978 | zgc:113423 | 23: 1042624 ~ 1056808 (-) |
ENSDARG00000033760 | pmelb | 23: 35672542 ~ 35690336 (+) |
ENSDARG00000037833 | mitfb | 23: 711075 ~ 764135 (-) |
ENSDARG00000002593 | slc45a2 | 21: 19445942 ~ 19484289 (+) |
ENSDARG00000070360 | inka1a | 11: 35048642 ~ 35056607 (+) |
ENSDARG00000091298 | pmela | 11: 3254252 ~ 3272020 (+) |
ENSDARG00000036117 | mchr2 | 24: 34806822 ~ 34823043 (+) |
ENSDARG00000071475 | aox5 | 22: 14083729 ~ 14115316 (-) |
ENSDARG00000013340 | NA | -- |
ENSDARG00000070925 | NA | -- |
ENSDARG00000074281 | NA | -- |
ENSDARG00000090446 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE159709 (Visium-sample A) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838131
|
GSE159709 | |
GSE159709 (Visium-sample B) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838132
|
GSE159709 | |
GSE159709 (Visium-sample C) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838133
|
GSE159709 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE115140 (cancer) | tumor | ST | cancer | adult, the ST sample sections from zebrafish melanoma tumors were obtained by sectioning the entire tumor with its surrounding | GSM3167486
|
GSE115140 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate2) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812176
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE104057 (heart replicate3) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788520
|
GSE104057 | |
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 | |
cvab004 (S2) | heart | baseline | late embryo, 1.08dpf, untreatment | S2 | cvab004 | |
cvab004 (S3) | heart | baseline | late embryo, 1.08dpf, untreatment | S3 | cvab004 |