Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
ercc4 | 12: 19958845 ~ 19975373 (+) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000069326 | mus81 | 7: 19850889 ~ 19883099 (+) |
ENSDARG00000024967 | fancg | 5: 41496490 ~ 41509339 (+) |
ENSDARG00000052827 | top3a | 3: 40235288 ~ 40254634 (-) |
ENSDARG00000002402 | ercc3 | 6: 9595414 ~ 9630081 (-) |
ENSDARG00000018623 | rad54l | 6: 3473657 ~ 3491357 (+) |
ENSDARG00000070485 | cenps | 6: 45934682 ~ 45937000 (+) |
ENSDARG00000038543 | wdr48b | 2: 49805892 ~ 49834052 (+) |
ENSDARG00000012325 | zgc:110269 | 2: 16449627 ~ 16458472 (+) |
ENSDARG00000023678 | ercc5 | 1: 474085 ~ 494280 (-) |
ENSDARG00000038114 | xpa | 1: 12068800 ~ 12097818 (+) |
ENSDARG00000042881 | nthl1 | 1: 54178703 ~ 54191626 (-) |
ENSDARG00000031680 | ercc1 | 9: 32674676 ~ 32684008 (-) |
ENSDARG00000067596 | fancb | 9: 54946499 ~ 54981471 (-) |
ENSDARG00000092134 | rad54b | 16: 26732086 ~ 26758184 (+) |
ENSDARG00000069283 | ercc8 | 8: 16738282 ~ 16757285 (+) |
ENSDARG00000068870 | fance | 8: 23731483 ~ 23737370 (+) |
ENSDARG00000055232 | fancc | 8: 30112624 ~ 30156117 (+) |
ENSDARG00000041376 | rmi1 | 8: 49766338 ~ 49769987 (+) |
ENSDARG00000068833 | dclre1b | 8: 24107030 ~ 24113604 (-) |
ENSDARG00000075612 | ercc6 | 13: 30874153 ~ 30910016 (+) |
ENSDARG00000007885 | fancl | 13: 26703897 ~ 26780797 (+) |
ENSDARG00000062269 | fan1 | 18: 21686115 ~ 21725805 (-) |
ENSDARG00000014161 | ercc4 | 12: 19958845 ~ 19975373 (+) |
ENSDARG00000079457 | faap100 | 12: 26538861 ~ 26547248 (+) |
ENSDARG00000076913 | eme1 | 12: 21669385 ~ 21684255 (-) |
ENSDARG00000077900 | si:ch211-141o9.10 | 12: 19272963 ~ 19282187 (-) |
ENSDARG00000077516 | recql4 | 19: 2752933 ~ 2822372 (-) |
ENSDARG00000021985 | ercc2 | 15: 23680018 ~ 23692359 (-) |
ENSDARG00000003938 | rpa1 | 15: 26498339 ~ 26538989 (-) |
ENSDARG00000063285 | ube2t | 23: 5104743 ~ 5108055 (+) |
ENSDARG00000025421 | tdrd3 | 11: 42726712 ~ 42819730 (+) |
ENSDARG00000011404 | fen1 | 24: 11908480 ~ 11921184 (+) |
ENSDARG00000061414 | slx4 | 22: 26798853 ~ 26844334 (+) |
ENSDARG00000092927 | si:dkey-44g23.2 | 22: 26804197 ~ 26806216 (+) |
ENSDARG00000051731 | faap24 | 25: 36287745 ~ 36292346 (-) |
ENSDARG00000019250 | fancf | 25: 35294670 ~ 35296165 (-) |
ENSDARG00000070216 | NA | -- |
ENSDARG00000077494 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE159709 (Visium-sample A) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838131
|
GSE159709 | |
GSE159709 (Visium-sample B) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838132
|
GSE159709 | |
GSE159709 (Visium-sample C) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838133
|
GSE159709 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE115140 (cancer) | tumor | ST | cancer | adult, the ST sample sections from zebrafish melanoma tumors were obtained by sectioning the entire tumor with its surrounding | GSM3167486
|
GSE115140 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate2) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812176
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 | |
GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate1) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788518
|
GSE104057 | |
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 | |
cvab004 (S2) | heart | baseline | late embryo, 1.08dpf, untreatment | S2 | cvab004 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE74652 (3 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury | GSM1924887
|
GSE74652 | |
GSE74652 (7 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury | GSM1924888
|
GSE74652 |