Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
slc45a2 | 21: 19445942 ~ 19484289 (+) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000056587 | cyp2r1 | 7: 27455321 ~ 27697234 (+) |
ENSDARG00000029204 | tyrp1a | 7: 74084203 ~ 74090168 (-) |
ENSDARG00000060366 | slc12a9 | 5: 38215924 ~ 38248462 (-) |
ENSDARG00000036994 | tbc1d16 | 3: 18437397 ~ 18502030 (+) |
ENSDARG00000056481 | vat1 | 3: 19914332 ~ 19971774 (+) |
ENSDARG00000044767 | tspan10 | 3: 15176737 ~ 15186292 (+) |
ENSDARG00000015531 | slc4a8 | 6: 40354424 ~ 40405934 (+) |
ENSDARG00000061303 | oca2 | 6: 37894220 ~ 38054851 (+) |
ENSDARG00000006560 | irf4a | 2: 854444 ~ 879800 (-) |
ENSDARG00000056151 | tyrp1b | 1: 19332837 ~ 19346048 (+) |
ENSDARG00000089334 | ednrba | 1: 28624186 ~ 28629471 (-) |
ENSDARG00000006008 | dct | 9: 53327332 ~ 53352682 (+) |
ENSDARG00000034572 | gpr143 | 9: 55056310 ~ 55090829 (+) |
ENSDARG00000055445 | slc22a15 | 17: 19499157 ~ 19511206 (+) |
ENSDARG00000015425 | slc24a4a | 17: 38784362 ~ 38887424 (-) |
ENSDARG00000024771 | slc24a5 | 18: 5213338 ~ 5227420 (+) |
ENSDARG00000020237 | mc1r | 18: 31226288 ~ 31227615 (-) |
ENSDARG00000062688 | gpnmb | 19: 20247435 ~ 20270207 (-) |
ENSDARG00000036158 | nudcd1 | 19: 22759116 ~ 22843480 (-) |
ENSDARG00000031348 | mc5ra | 19: 12762887 ~ 12803408 (+) |
ENSDARG00000039077 | tyr | 15: 43799258 ~ 43818697 (+) |
ENSDARG00000033760 | pmelb | 23: 35672542 ~ 35690336 (+) |
ENSDARG00000037833 | mitfb | 23: 711075 ~ 764135 (-) |
ENSDARG00000002593 | slc45a2 | 21: 19445942 ~ 19484289 (+) |
ENSDARG00000091298 | pmela | 11: 3254252 ~ 3272020 (+) |
ENSDARG00000055629 | dipk2ab | 24: 5653162 ~ 5713799 (-) |
ENSDARG00000015749 | hps3 | 22: 38202614 ~ 38224321 (-) |
ENSDARG00000013581 | NA | -- |
ENSDARG00000017217 | NA | -- |
ENSDARG00000028776 | NA | -- |
ENSDARG00000068381 | NA | -- |
ENSDARG00000087722 | NA | -- |
ENSDARG00000053363 | NA | -- |
ENSDARG00000060524 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE159709 (Visium-sample A) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838131
|
GSE159709 | |
GSE159709 (Visium-sample B) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838132
|
GSE159709 | |
GSE159709 (Visium-sample C) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838133
|
GSE159709 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE115140 (cancer) | tumor | ST | cancer | adult, the ST sample sections from zebrafish melanoma tumors were obtained by sectioning the entire tumor with its surrounding | GSM3167486
|
GSE115140 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 |