Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
kdsr | 2: 13223755 ~ 13254821 (-) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000078541 | cers3a | 7: 9904627 ~ 9961727 (+) |
ENSDARG00000069940 | ppap2d | 3: 47322494 ~ 47387377 (+) |
ENSDARG00000018619 | cers4b | 2: 56356652 ~ 56387041 (-) |
ENSDARG00000012021 | kdsr | 2: 13223755 ~ 13254821 (-) |
ENSDARG00000002231 | plpp2a | 2: 52232630 ~ 52306803 (+) |
ENSDARG00000034817 | asah1b | 1: 16654254 ~ 16665044 (-) |
ENSDARG00000079397 | cerkl | 9: 44094311 ~ 44289636 (-) |
ENSDARG00000053583 | cers6 | 9: 48870122 ~ 48937240 (-) |
ENSDARG00000014333 | ormdl1 | 9: 41024973 ~ 41034174 (+) |
ENSDARG00000058992 | cers2b | 16: 1362250 ~ 1399328 (+) |
ENSDARG00000069893 | sphk2 | 16: 32131568 ~ 32147182 (+) |
ENSDARG00000079369 | si:ch211-212g7.6 | 20: 20275001 ~ 20312789 (-) |
ENSDARG00000074287 | sptlc2b | 20: 5330540 ~ 5369105 (-) |
ENSDARG00000076218 | b3galt4 | 8: 53107380 ~ 53108207 (-) |
ENSDARG00000079790 | NA | 8: 650342 ~ 665469 (+) |
ENSDARG00000071203 | sptssa | 17: 9944495 ~ 9950911 (-) |
ENSDARG00000018976 | sptlc2a | 17: 17804727 ~ 17856118 (+) |
ENSDARG00000042544 | degs2 | 17: 30894431 ~ 30900380 (+) |
ENSDARG00000037091 | asah1a | 14: 30272891 ~ 30278408 (+) |
ENSDARG00000007347 | degs1 | 13: 502230 ~ 514843 (+) |
ENSDARG00000060534 | sgpp1 | 13: 37491804 ~ 37519817 (-) |
ENSDARG00000030743 | sptlc3 | 13: 34804243 ~ 34862484 (-) |
ENSDARG00000036337 | cers3b | 18: 7309150 ~ 7325818 (+) |
ENSDARG00000012829 | asah2 | 12: 6117682 ~ 6142673 (+) |
ENSDARG00000013704 | cers2a | 19: 8758336 ~ 8812963 (-) |
ENSDARG00000091658 | sptssb | 15: 1679962 ~ 1687204 (-) |
ENSDARG00000079608 | NA | 15: 42235449 ~ 42255867 (+) |
ENSDARG00000061520 | b4galnt1a | 23: 28097282 ~ 28123767 (-) |
ENSDARG00000060282 | rnf121 | 21: 44773237 ~ 44784723 (+) |
ENSDARG00000042995 | sptlc1 | 10: 5234327 ~ 5265160 (+) |
ENSDARG00000093366 | acer3 | 10: 38526496 ~ 38544426 (+) |
ENSDARG00000058966 | zgc:112332 | 24: 18448108 ~ 18467064 (-) |
ENSDARG00000031387 | cers4a | 22: 4707663 ~ 4733106 (+) |
ENSDARG00000063412 | cers1 | 22: 5176255 ~ 5232099 (+) |
ENSDARG00000002365 | cers5 | 22: 5758090 ~ 5822147 (-) |
ENSDARG00000028896 | plpp2b | 22: 21549419 ~ 21584670 (+) |
ENSDARG00000090063 | fa2h | 25: 13558992 ~ 13614863 (-) |
ENSDARG00000059158 | NA | -- |
ENSDARG00000079139 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE159709 (Visium-sample A) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838131
|
GSE159709 | |
GSE159709 (Visium-sample B) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838132
|
GSE159709 | |
GSE159709 (Visium-sample C) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838133
|
GSE159709 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE115140 (cancer) | tumor | ST | cancer | adult, the ST sample sections from zebrafish melanoma tumors were obtained by sectioning the entire tumor with its surrounding | GSM3167486
|
GSE115140 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate2) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812176
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 | |
GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate1) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788518
|
GSE104057 | |
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE104057 (heart replicate3) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788520
|
GSE104057 | |
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 | |
cvab004 (S2) | heart | baseline | late embryo, 1.08dpf, untreatment | S2 | cvab004 | |
cvab004 (S3) | heart | baseline | late embryo, 1.08dpf, untreatment | S3 | cvab004 | |
cvab004 (S4) | heart | baseline | late embryo, 1.08dpf, untreatment | S4 | cvab004 | |
cvab004 (S5) | heart | baseline | late embryo, 1.08dpf, untreatment | S5 | cvab004 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE74652 (3 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury | GSM1924887
|
GSE74652 | |
GSE74652 (7 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury | GSM1924888
|
GSE74652 |