G239887


Basic Information

Item Value
gene id G239887
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 4478034 ~ 4478303 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272186
CGAAGTCACTTCTACTAGCCACTTTGGCGGGTTGAATTTTTGATACTGTATAATATACATTTTTTCAATTGTAGTCTTTTAAAAAGGCATCTGAAACAATAAACTAAGTGCAATGTAGTGTTGTCAAAAATATCATTTTTTTCGATACATATCGATACTGAAATATCTGAAATGCTCCAATACTCATTTTCCGCAAAATAGACACACAATACCAGCTGCGGCTTCTCGCTCTCTCATCTCTCCAATAGTGAGTTGACGCACAAACCCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272186 True 270 lncRNA 0.37 1 4478034 4478303

Neighbor

gene id symbol gene type direction distance location
CI01000055_04429659_04441786 PKMB coding upstream 35503 4429659 ~ 4442531 (+)
CI01000055_04334410_04337430 NA coding upstream 140604 4334304 ~ 4337430 (+)
CI01000055_04331311_04334095 NA coding upstream 143784 4331311 ~ 4334250 (+)
CI01000055_04315348_04320581 NA coding upstream 157453 4315043 ~ 4320581 (+)
CI01000055_04312501_04314406 NA coding upstream 163019 4312501 ~ 4315015 (+)
CI01000055_04565665_04574485 NA coding downstream 87362 4565665 ~ 4574705 (+)
CI01000055_04644727_04647551 PIM3 coding downstream 165827 4644130 ~ 4648605 (+)
CI01000055_04653437_04666121 BRD1B coding downstream 175079 4653382 ~ 4667047 (+)
CI01000055_04815417_04830336 PRR5L coding downstream 336943 4815246 ~ 4830907 (+)
CI01000055_04834611_04844496 API5 coding downstream 356308 4834611 ~ 4845302 (+)
G239856 NA non-coding upstream 76072 4401679 ~ 4401962 (+)
G239827 NA non-coding upstream 92640 4382690 ~ 4385394 (+)
G239806 NA non-coding upstream 195211 4274970 ~ 4282823 (+)
G239804 NA non-coding upstream 203510 4274295 ~ 4274524 (+)
CI01000055_04265119_04272728 NA non-coding upstream 204619 4265119 ~ 4273913 (+)
G239889 NA non-coding downstream 1136 4479439 ~ 4479673 (+)
G239890 NA non-coding downstream 3988 4482291 ~ 4482790 (+)
G239821 NA non-coding downstream 4519 4482822 ~ 4491433 (+)
G239900 NA non-coding downstream 53394 4531697 ~ 4531902 (+)
G239901 NA non-coding downstream 54487 4532790 ~ 4533012 (+)
G239755 NA other upstream 222942 4254210 ~ 4255092 (+)
G239761 NA other upstream 264632 4162250 ~ 4213402 (+)
CI01000055_02542526_02542861 NA other upstream 1933916 2542216 ~ 2544118 (+)
G238534 NA other upstream 2808790 1668410 ~ 1669244 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 687189 5162990 ~ 5166647 (+)
G240099 NA other downstream 1058215 5525472 ~ 5544153 (+)
CI01000055_05614889_05616453 NA other downstream 1136075 5614065 ~ 5617591 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 1608522 6087034 ~ 6088759 (+)
G240344 NA other downstream 1685557 6163860 ~ 6164011 (+)

Expression


Co-expression Network