G239804


Basic Information

Item Value
gene id G239804
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 4274295 ~ 4274524 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272090
TATTAATATTGTTGTTATTATTAATTATTATTATGTTATTATTAATATTGTTGTTGTTGTGTTTATTATTCTTGTTATATCAATTATTATTAATTACTAATTTATTATTGCTAGTAGTATTAGTAGTAGCATTATTATTATTGTTTTAGTATTTTTTCATTCTTGTTACGTTTTATTTATTTATTAATTTATTTATTATTAATTTCTAGGGATACTTTTTTTTAGTACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272090 True 230 lncRNA 0.15 1 4274295 4274524

Neighbor

gene id symbol gene type direction distance location
CI01000055_04265119_04272728 NA coding upstream 382 4265119 ~ 4273913 (+)
CI01000055_04229735_04231409 NA coding upstream 42693 4229735 ~ 4231602 (+)
CI01000055_04220373_04228785 SLC15A5 coding upstream 45389 4220373 ~ 4228906 (+)
CI01000055_04104413_04124421 AASS coding upstream 149874 4104413 ~ 4124421 (+)
CI01000055_04097751_04100235 FEZF1 coding upstream 173800 4096787 ~ 4100495 (+)
CI01000055_04288760_04295553 NA coding downstream 14236 4288760 ~ 4295782 (+)
CI01000055_04297863_04299835 NFYBB, NFYB, NFYBA coding downstream 23339 4297863 ~ 4300318 (+)
CI01000055_04312501_04314406 NA coding downstream 37977 4312501 ~ 4315015 (+)
CI01000055_04315348_04320581 NA coding downstream 40519 4315043 ~ 4320581 (+)
CI01000055_04331311_04334095 NA coding downstream 56787 4331311 ~ 4334250 (+)
G239799 NA non-coding upstream 12496 4259330 ~ 4261799 (+)
G239754 NA non-coding upstream 23378 4249518 ~ 4250917 (+)
G239748 NA non-coding upstream 147269 4126527 ~ 4127026 (+)
G239643 NA non-coding upstream 308332 3880366 ~ 3965963 (+)
G239806 NA non-coding downstream 446 4274970 ~ 4282823 (+)
G239827 NA non-coding downstream 108166 4382690 ~ 4385394 (+)
G239856 NA non-coding downstream 127155 4401679 ~ 4401962 (+)
G239887 NA non-coding downstream 203510 4478034 ~ 4478303 (+)
G239889 NA non-coding downstream 204915 4479439 ~ 4479673 (+)
G239755 NA other upstream 19203 4254210 ~ 4255092 (+)
G239761 NA other upstream 60893 4162250 ~ 4213402 (+)
CI01000055_02542526_02542861 NA other upstream 1730177 2542216 ~ 2544118 (+)
G238534 NA other upstream 2605051 1668410 ~ 1669244 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 890968 5162990 ~ 5166647 (+)
G240099 NA other downstream 1261994 5525472 ~ 5544153 (+)
CI01000055_05614889_05616453 NA other downstream 1339854 5614065 ~ 5617591 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 1812301 6087034 ~ 6088759 (+)
G240344 NA other downstream 1889336 6163860 ~ 6164011 (+)

Expression


Co-expression Network