CI01000055_04104413_04124421 (AASS)


Basic Information

Item Value
gene id CI01000055_04104413_04124421
gene name AASS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 4104413 ~ 4124421 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_04104413_04124421.mRNA
ATGCTGCGTCTCGTGAGGAGCCAGGGCAGAGGGTTTAGGGTCTGCATGTGCTGTCAGCGGAGGTCTCAGCATCACCATCATCACCAGCAGAATCATAAGAGCGTCGTAGCCATTCGGCGCGAGGATGTCAACGTGTGGGAGAGACGTGCGCCCCTGGCACCACGACATGTCAGGGAGATGACAGCGGCTGGACACAAGGTGCTCGTGCAGCCCTCCAACAGACGGGCCATCCATGACAGATACTATGAAAAAGCAGGTGCTGTTATCCAGGAGGACATCTCAGAGGCGTCTCTCATCATCGGTGTGAAAAGGCCCCCGGAGGAAAAGGTGTACCCCCGCAAGACCTATGCCTTCTTCTCTCACACAATTAAAGCACAAGAGCCAAACATGGGGCTCCTGGACGACCTTCTTAAAAAGGAAGTTCGACTCATTGATTATGAAAAAATGGTGGATGCCAATGGCTTCAGAATTGTAGCGTTTGGACAGTGGGCTGGTGTTGCCGGAATGATTAATATTTTACACGGTCTGGGCCTGCGTTTTCTTGCCCTTGGACACCACACCCCATTTATGCACATTGGTATGGCACACAACTACAGAAACGTCAGCCAGGCCATCCAGGCAGTGAGGGATTGTGGTTACGAAATATCCTTAGGTCTGATGCCCAGGTCCATAGGTCCTCTCACATTTGTGTTCACTGGCACCGGCAATGTGTCCAAGGGTGCCCAAGAAATTTTCAGTGAGCTGCCCTGTGAGTACGTGGAACCTCATGAATTGAAAGAAGTCTCTGAGAGTGGAGACATGTCCAAAGTGTACGCCACAGTGATCAGCAGACATCACCACCTGATGAGAAAGAGTGACGGAGTCTATGACCCCCTGGAGTATGAACACCATCCTGAGCTTTACACGTCTAACTTCAGGAAGGCCGTGGCCCCTTACACAACCTGCCTGATAAACGGCATATACTGGGACCCTCACACGCCCAGACTGCTGCGGCGACTGGACGCCCAGCGGCTGATCAGACCTGTTATACCTGCGTCGTCATCACCTGATCACGGCTGCCCTGCACTTCCCCACAAGTTCTTGGCCATTTGTGACATCTCTGCGGACACGGGCGGCTCCATTGAGTTCATGACAGAGTGTACCACTATTGAGAAACCCTTCTGCATGTATGATGCCAACCAGCATATTGACCATGACAGCGTGGAAGGTAACGGCATTCTCATGTGCTCCATCGATAACCTACCCGCCCAGCTGCCTATTGAGGCGACTGAGTATTTTGGTGACCGGCTGTTCCCTTACATCTGGGAGATGCTCCCATCAGACGCAACCAGACCGCTAGAGGAAGAGGATTTCTCTCCACAAGTCAGAGATGCTGTAATTACGTCCAACGGGAAGTTAACGCCTAAGTTTGAATACATTCAGAAACTTCGAGAAAGAAAGGAATCGGAGCAGATCCTAAAGAAAGGAGGAATGAAGCGGGTGCTGTTGCTGGGCTCAGGCTATGTGTCTGGGCCAGTTATCGAGTATCTCACCAGGGACGCTGGCACCCAGGTCACAGTGGCTTCAAATCTGTTGCATCAGGCTGAGGACATGGCAGCCAAGTATCCCAACACCATCGCCGTGATGCTGGACATCACCAGCCAGAAAGGCCACCTCGAGTCTCTGATCAAAGACCACGACATCTTTACAATTATTTGTTGTTTTTTGGTATTTAGCATGCTGCCGTACGCATTTCATTCACAAGTAGCCAAGCACTGCATTAAAATGAAGGTGAACATGGTGACCGCCAGTTACATGAGCCCCGCCATGAAGGAGCTTCAGAAGAGTGCCGAAGATGCTGGCATCACCATCGTCAATGAGATGGGTCTGGACCCTGGCATTGATCACATGTTGGCCATGGAGTGCATCGACCAGGCCAAGGCAGACGGTTGCACTGTGGAGTCTTACAGCTCTTTTTGTGGTGGTCTTCCTGCTCCAGAGTGCTCAGACAACCCACTGCGTTATAAGTTTAGCTGGAGTCCGTATGGTGTCCTGCTCAACACCATCAGTCCAGCCATCTATCTGAAAGACAACCAGGTTGTCAGTGTTCCTCCTGGCGGTGCTCTCCTGGATGTCACAAAGCCCATGGACTTCATGCCTGGTTTCAACCTGGAGGCCTTTCCCAACCGAGATAGCACCACGTACGCCCAGCCGTATGGGATTGAGTCCGCACACACGCTGATCAGAGGAACTCTGCGCTTCAAGGGCTTCTCCTCTGCAATGAGTGGCTTTGTGAAACTGGGACTTATCAACACTGAGCCGTGTCCACTGTTGGACCACACAGCTTCTCCTCTCTCATGGAAAGAGCTTCTCTGTAAGCTGACCGGCTTATCCGCAACTGAGAGCAACAGTGCCTTTGAGGACGCTGTTTATGAGCGGATCGGCAAGGACGACTTCAGAATGCAGAGCCTCAGATTGCTCGGGATGCTCAGTGAAGAGCCGGTTCCTCACGCCGACACCATCTTAGCAGCGCTTGCTAAGCACCTGGAGGCCAAACTCTCCTTTGCTAAAGGCGAGCGCGATATGATCATCATGAGGAACGATGTTGGAATCAGACACCCAACAGGCGAACTGGAGACCAAACACATCAGTCTGGTGGTTTACGGGGATCCCAATGGATACTCAGCCATGGCCAAAACTGTGGGCTACCCTGCAGCCATCGCAGCCCATATGGTGCTCAAC

Function

symbol description
aass Predicted to enable saccharopine dehydrogenase activity. Predicted to be involved in lysine biosynthetic process via aminoadipic acid. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in hyperlysinemia. Orthologous to human AASS (aminoadipate-semialdehyde synthase).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
K14157 AASS; alpha-aminoadipic semialdehyde synthase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_04104413_04124421.mRNA True 2721 mRNA 0.52 22 4104413 4124421

Neighbor

gene id symbol gene type direction distance location
CI01000055_04097751_04100235 FEZF1 coding upstream 3918 4096787 ~ 4100495 (+)
CI01000055_04035172_04094367 CADPS2 coding upstream 9757 4035097 ~ 4094656 (+)
CI01000055_04023182_04033823 CADPS2 coding upstream 70518 4023182 ~ 4033895 (+)
CI01000055_03909546_03911972 NA coding upstream 192234 3908867 ~ 3912179 (+)
CI01000055_03903278_03905608 NA coding upstream 198679 3903090 ~ 3905734 (+)
CI01000055_04220373_04228785 SLC15A5 coding downstream 95952 4220373 ~ 4228906 (+)
CI01000055_04229735_04231409 NA coding downstream 105314 4229735 ~ 4231602 (+)
CI01000055_04265119_04272728 NA coding downstream 140698 4265119 ~ 4273913 (+)
CI01000055_04288760_04295553 NA coding downstream 164339 4288760 ~ 4295782 (+)
CI01000055_04297863_04299835 NFYBB, NFYB, NFYBA coding downstream 173442 4297863 ~ 4300318 (+)
G239643 NA non-coding upstream 138450 3880366 ~ 3965963 (+)
G239646 NA non-coding upstream 178554 3869732 ~ 3925859 (+)
G239599 NA non-coding upstream 396409 3707467 ~ 3708004 (+)
G239598 NA non-coding upstream 399188 3705024 ~ 3705225 (+)
G239565 NA non-coding upstream 479408 3624783 ~ 3625005 (+)
G239748 NA non-coding downstream 2106 4126527 ~ 4127026 (+)
G239754 NA non-coding downstream 125097 4249518 ~ 4250917 (+)
G239799 NA non-coding downstream 134909 4259330 ~ 4261799 (+)
G239804 NA non-coding downstream 149874 4274295 ~ 4274524 (+)
CI01000055_02542526_02542861 NA other upstream 1560295 2542216 ~ 2544118 (+)
G238534 NA other upstream 2435169 1668410 ~ 1669244 (+)
G237840 NA other upstream 3684481 418925 ~ 419932 (+)
G237680 NA other upstream 4083251 20902 ~ 21162 (+)
G239761 NA other downstream 37829 4162250 ~ 4213402 (+)
G239755 NA other downstream 129789 4254210 ~ 4255092 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1041071 5162990 ~ 5166647 (+)
G240099 NA other downstream 1412097 5525472 ~ 5544153 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024170 aass coding NC_007136.7 CM002909.2 28279577 ~ 28336106 (+)