CI01000055_04644727_04647551 (PIM3)


Basic Information

Item Value
gene id CI01000055_04644727_04647551
gene name PIM3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 4644130 ~ 4648605 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_04644727_04647551.mRNA
TTATATAAACTATGCAACGTGGTTGGTCTTGTTATATAGCCTAAGCGCAAAGCTCTCAGACGAGGTATCCATGGGCGTCTCGCACTATTCACCAGCGCACTCTTTATTCCTGCTGATGAATTGTCATACATTTATAGTGTCTTTCTAGATTTTACAACGTAGTATTTTTTTCCTTATGAAACGCTAAAGAATTTTGAGGAATGTGTTTGTCTTTAATTTAAGTGTATTTAGTCTATCCGTGGCGGAGGGATATGTGCAGCGCGCCCAGCGCCCAAACACAAGAATTAAGAGTTAATACGGTCGGTCTCCCCGCTCTCACACACAGACACATCAACTGAGCGCGCCGACCAGACTCAAAAGCGCAAACGTGTGCAGTTCTTTCTCACTATGGGTGCGCGGGGACATTTGTGAATAATTACCGGAGTTTGACACCTTTGTAGAAGAGGAATCGGAATCGTTTTGCGAGCATTCGTGGGATTTTCCAGCGGAGTCCCACTACTAAATACATTCGGTTTTTACTGTGAAGGACGGGGTGCCGGTGTTTTCCAGTCCTTAGCACAGTTACGCATCTTAAGGACTAAGAATCGACAACGAAAAATGTTACTTTCCAAGTTTGGATCTTTTTCCCATATTTGCAACACAACCAACATCGACCACTTGCCGGTGAAAATTCAACTTCAAGCAGCCAAGGCCGAAAGGGAGCCATTTGAGAAGGTTTATCATGTGGGTTCGGTGCTGGGAAGCGGTGGGTTTGGGACAGTGTACGCCGGTACTCGGATCTCAGACGCGTTGCCGGTTGCGGTTAAACACGTCGCTAAAGAGAGAGTGACCGAATGGGGTACTATTAATGGGTCACTGGTTCCTCTCGAGATCGTTTTGTTGAAGAAAGTGGGAAGTACGTTTCAGGGGGTCATTAAACTCATAGATTGGTATGAGAGACCCGACGGCTGGTTGATTATAATGGAGAGACCGGAGATGGTGAAGGATTTATTCGACTACATCACGGAGAAAGGCGCGCTGGATGAGGACACCGCCCGGGGCTTCTTCAGGCAGGTTTTGGAGGCGGTTCGGCACTGCTATAGCTGCGGGGTGGTTCACCGGGATATCAAAGACGAGAACCTCCTGGTGGATTTACGCACGGGAGATCTGAAGCTCATTGACTTCGGCTCCGGGGCCATCCTCAAGGACACAGTCTACACAGACTTTGATGGCACGCGAGTGTACAGCCCCCCCGAGTGGATTCGTTACCACAGGTACCACGGACGCTCAGCAACCGTGTGGTCCCTTGGCGTCCTGCTGTACGACATGGTGTGCGGCGACATCCCGTTTGAGCACGATGAGGAGATTCTGAGAGGACGGCTCTTTTTCAGGAGAAGAGTCTCTCCGGTGTGTCAGCAGCTCATCAAATGGTGCCTCTGCTTGAGACCTTCAGATCGGCCTACCTTGGAGCAGATCTTTGAGCATCAGTGGATGCGGACGGAAGAAAGCCCGAAAGCAGAAAGCGTCGACATCACGCTTCACTCTATCAGCACAGAATCGGGCAAAGAAAGCCTTTGACGGATGCAGGGATGCCGAGTAAATGGACTCTGAGACCTTTTTGTCCTTGTTCCCAGTCTGTTGGTTATCAGGACTTCGATTTGTGTTACATAAATGTCTTTTTTTGGTTGTTTTTCTTGCTAAGGGTGAGTCGTTACCCGTAGGGATTGCGCGAGCAGCAATGCTAGTGATCCTTTGATCTTACTGGTTGCTCTTATAGAGCTTGGACATTATTTTCCTTTTAGACTATCTTTTTAGTTTTCGGTGCCTTTTTTGGAAAGCTGCTTTTATGGGATTCAAGTCACGACAGACGCCAGGTGGATTTTCATGGATTTTAGGGGAACTCCCCTGGATTCATGGGAACCTTCAAAGACTGTATCTAGTTATGTGGTGGGTCTCCCTTGCCCTCTAGTGGTCGAATACTTGAAGTACACACTTACTACTCTCTTAACACTATCTCTCTGCTGCTCTGCCATTCACAAACACTATTTCGATGGTTTTCCCTTCTTTTGTTGTTTTCTGAATGTCTTCCACTACTTCATCTGTTGACGTCACTTTTTAGACTTTGCTTAGCAGAGACTTGAGTGATGTGCACAATCAATGCAATATTCATGGACTCACTTCTTTCTTTTTCATTTTTTTTTTTTTTTTAACTTTTTATTTTTAAATACAAGTATTTGTATTGTATTTATGTACATTTTTCTTCCATGTATCTTATTTATTCATGCAATACAAACATTCCACATTCAGTGGCTATTTATTTATTTATTCATTCATTTTATACCATCTGCAAAAAGTAAATTGAAATTGTTAAATGTAAAGAGTTCCCTGGGCTTATCTTTAGTTTAACCTAAAGGATCCTAGACACGCTAAAGCTATCTAATACTGATACAAATATAAGATTGAGATGTTTAGTGATGCCATTTTCTGATGTAGTGTAAAATTTAGAATCAGTTTTTTTCTCCATGTGAAGTGGAAGTAAAAATGTGTTTTAGTCCTTCCACTGTGACAGTGTGGATTTTTTTTTTTTTTTTTTTTGAACTGGTGAAACATTTATTTTTTTATATTGGACACA

Function

symbol description
pim3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human PIM3 (Pim-3 proto-oncogene, serine/threonine kinase).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K08807 PIM3; proto-oncogene serine/threonine-protein kinase Pim-3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_04644727_04647551.mRNA True 2611 mRNA 0.44 6 4644130 4648605

Neighbor

gene id symbol gene type direction distance location
CI01000055_04565665_04574485 NA coding upstream 69425 4565665 ~ 4574705 (+)
CI01000055_04429659_04441786 PKMB coding upstream 201599 4429659 ~ 4442531 (+)
CI01000055_04334410_04337430 NA coding upstream 306700 4334304 ~ 4337430 (+)
CI01000055_04331311_04334095 NA coding upstream 309880 4331311 ~ 4334250 (+)
CI01000055_04315348_04320581 NA coding upstream 323549 4315043 ~ 4320581 (+)
CI01000055_04653437_04666121 BRD1B coding downstream 4777 4653382 ~ 4667047 (+)
CI01000055_04815417_04830336 PRR5L coding downstream 166641 4815246 ~ 4830907 (+)
CI01000055_04834611_04844496 API5 coding downstream 186006 4834611 ~ 4845302 (+)
CI01000055_04869576_04887020 HSD17B12, HSD17B12A coding downstream 220878 4869483 ~ 4887959 (+)
CI01000055_04888583_04898249 ALKBH3 coding downstream 239978 4888583 ~ 4898368 (+)
G239937 NA non-coding upstream 1050 4642736 ~ 4643080 (+)
G239935 NA non-coding upstream 3773 4640057 ~ 4640357 (+)
G239934 NA non-coding upstream 4156 4639722 ~ 4639974 (+)
G239901 NA non-coding upstream 111118 4532790 ~ 4533012 (+)
G239900 NA non-coding upstream 112228 4531697 ~ 4531902 (+)
G239938 NA non-coding downstream 25307 4673912 ~ 4674184 (+)
G239944 NA non-coding downstream 31207 4679812 ~ 4680075 (+)
G239998 NA non-coding downstream 142080 4790685 ~ 4790903 (+)
G240000 NA non-coding downstream 145182 4793787 ~ 4794005 (+)
G240020 NA non-coding downstream 152736 4801341 ~ 4801545 (+)
CI01000055_04265119_04272728 NA other upstream 371415 4265119 ~ 4273913 (+)
G239755 NA other upstream 389038 4254210 ~ 4255092 (+)
G239761 NA other upstream 430728 4162250 ~ 4213402 (+)
CI01000055_02542526_02542861 NA other upstream 2100012 2542216 ~ 2544118 (+)
G238534 NA other upstream 2974886 1668410 ~ 1669244 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 516887 5162990 ~ 5166647 (+)
G240099 NA other downstream 887913 5525472 ~ 5544153 (+)
CI01000055_05614889_05616453 NA other downstream 965773 5614065 ~ 5617591 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 1438220 6087034 ~ 6088759 (+)
G240344 NA other downstream 1515255 6163860 ~ 6164011 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024190 pim3 coding NC_007136.7 CM002909.2 29662411 ~ 29666902 (+)