Gene
RNA
| Item | Value |
|---|---|
| gene id | G239938 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 4673912 ~ 4674184 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU272243 | True | 273 | lncRNA | 0.34 | 1 | 4673912 | 4674184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_04653437_04666121 | BRD1B | coding | upstream | 6865 | 4653382 ~ 4667047 (+) |
| CI01000055_04644727_04647551 | PIM3 | coding | upstream | 25307 | 4644130 ~ 4648605 (+) |
| CI01000055_04565665_04574485 | NA | coding | upstream | 99207 | 4565665 ~ 4574705 (+) |
| CI01000055_04429659_04441786 | PKMB | coding | upstream | 231381 | 4429659 ~ 4442531 (+) |
| CI01000055_04334410_04337430 | NA | coding | upstream | 336482 | 4334304 ~ 4337430 (+) |
| CI01000055_04815417_04830336 | PRR5L | coding | downstream | 141062 | 4815246 ~ 4830907 (+) |
| CI01000055_04834611_04844496 | API5 | coding | downstream | 160427 | 4834611 ~ 4845302 (+) |
| CI01000055_04869576_04887020 | HSD17B12, HSD17B12A | coding | downstream | 195299 | 4869483 ~ 4887959 (+) |
| CI01000055_04888583_04898249 | ALKBH3 | coding | downstream | 214399 | 4888583 ~ 4898368 (+) |
| CI01000055_04906688_04910244 | C14H11ORF96, CLG19H11ORF96, C6H11ORF96, CUNH11ORF96 | coding | downstream | 229776 | 4903960 ~ 4910978 (+) |
| G239937 | NA | non-coding | upstream | 30832 | 4642736 ~ 4643080 (+) |
| G239935 | NA | non-coding | upstream | 33555 | 4640057 ~ 4640357 (+) |
| G239934 | NA | non-coding | upstream | 33938 | 4639722 ~ 4639974 (+) |
| G239901 | NA | non-coding | upstream | 140900 | 4532790 ~ 4533012 (+) |
| G239900 | NA | non-coding | upstream | 142010 | 4531697 ~ 4531902 (+) |
| G239944 | NA | non-coding | downstream | 5628 | 4679812 ~ 4680075 (+) |
| G239998 | NA | non-coding | downstream | 116501 | 4790685 ~ 4790903 (+) |
| G240000 | NA | non-coding | downstream | 119603 | 4793787 ~ 4794005 (+) |
| G240020 | NA | non-coding | downstream | 127157 | 4801341 ~ 4801545 (+) |
| G240014 | NA | non-coding | downstream | 179613 | 4853797 ~ 4863837 (+) |
| CI01000055_04265119_04272728 | NA | other | upstream | 401197 | 4265119 ~ 4273913 (+) |
| G239755 | NA | other | upstream | 418820 | 4254210 ~ 4255092 (+) |
| G239761 | NA | other | upstream | 460510 | 4162250 ~ 4213402 (+) |
| CI01000055_02542526_02542861 | NA | other | upstream | 2129794 | 2542216 ~ 2544118 (+) |
| G238534 | NA | other | upstream | 3004668 | 1668410 ~ 1669244 (+) |
| CI01000055_05163240_05166231 | PIGY, PYURF | other | downstream | 491308 | 5162990 ~ 5166647 (+) |
| G240099 | NA | other | downstream | 862334 | 5525472 ~ 5544153 (+) |
| CI01000055_05614889_05616453 | NA | other | downstream | 940194 | 5614065 ~ 5617591 (+) |
| CI01000055_06087070_06088629 | ETFRF1, LYRM5, LYRM5B | other | downstream | 1412641 | 6087034 ~ 6088759 (+) |
| G240344 | NA | other | downstream | 1489676 | 6163860 ~ 6164011 (+) |
