G239937


Basic Information

Item Value
gene id G239937
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 4642736 ~ 4643080 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU272242
CTACTTTAAGATGCAGTATTACACCATGCAGTTAGCATATGACCAGTTATTATGAATAAGAACTAAAGCTATTTGATATATGGGTCATTGACAAATAAGGTTTTTAAAAGCGTAAAAAACATATTGGAGATATAATAAAGTGTTAACTATGAGATTATGTGGTTTTTATAATCAATTAACATTGCTTTTGTCATTTTTTTACAAGATGGACAAAATTTGTCACCAAAAAAGTCATTCGGTTTAACCAAAATTTCAGTTTTACCGAATGACACTTTTGGATATACCGAATGACGATATTTTCAAACAATGCTAACAGACTGATATCTAGCTAGCTAGCAAAAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272242 True 345 lncRNA 0.30 1 4642736 4643080

Neighbor

gene id symbol gene type direction distance location
CI01000055_04565665_04574485 NA coding upstream 68031 4565665 ~ 4574705 (+)
CI01000055_04429659_04441786 PKMB coding upstream 200205 4429659 ~ 4442531 (+)
CI01000055_04334410_04337430 NA coding upstream 305306 4334304 ~ 4337430 (+)
CI01000055_04331311_04334095 NA coding upstream 308486 4331311 ~ 4334250 (+)
CI01000055_04315348_04320581 NA coding upstream 322155 4315043 ~ 4320581 (+)
CI01000055_04644727_04647551 PIM3 coding downstream 1050 4644130 ~ 4648605 (+)
CI01000055_04653437_04666121 BRD1B coding downstream 10302 4653382 ~ 4667047 (+)
CI01000055_04815417_04830336 PRR5L coding downstream 172166 4815246 ~ 4830907 (+)
CI01000055_04834611_04844496 API5 coding downstream 191531 4834611 ~ 4845302 (+)
CI01000055_04869576_04887020 HSD17B12, HSD17B12A coding downstream 226403 4869483 ~ 4887959 (+)
G239935 NA non-coding upstream 2379 4640057 ~ 4640357 (+)
G239934 NA non-coding upstream 2762 4639722 ~ 4639974 (+)
G239901 NA non-coding upstream 109724 4532790 ~ 4533012 (+)
G239900 NA non-coding upstream 110834 4531697 ~ 4531902 (+)
G239821 NA non-coding upstream 151303 4482822 ~ 4491433 (+)
G239938 NA non-coding downstream 30832 4673912 ~ 4674184 (+)
G239944 NA non-coding downstream 36732 4679812 ~ 4680075 (+)
G239998 NA non-coding downstream 147605 4790685 ~ 4790903 (+)
G240000 NA non-coding downstream 150707 4793787 ~ 4794005 (+)
G240020 NA non-coding downstream 158261 4801341 ~ 4801545 (+)
CI01000055_04265119_04272728 NA other upstream 370021 4265119 ~ 4273913 (+)
G239755 NA other upstream 387644 4254210 ~ 4255092 (+)
G239761 NA other upstream 429334 4162250 ~ 4213402 (+)
CI01000055_02542526_02542861 NA other upstream 2098618 2542216 ~ 2544118 (+)
G238534 NA other upstream 2973492 1668410 ~ 1669244 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 522412 5162990 ~ 5166647 (+)
G240099 NA other downstream 893438 5525472 ~ 5544153 (+)
CI01000055_05614889_05616453 NA other downstream 971298 5614065 ~ 5617591 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 1443745 6087034 ~ 6088759 (+)
G240344 NA other downstream 1520780 6163860 ~ 6164011 (+)

Expression


Co-expression Network