G242105


Basic Information

Item Value
gene id G242105
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 435089 ~ 435445 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU274842
GGCGTATATCCGTGGTATTTGAGATGTAGGTTCGTTGTCTTCTGATTCAGGATCAGACTCTGGCTCAAACATGTATGGCTGAATTTTACCGGTTGCCATTTTTCAGCATCGGGAAGTTTTCAAAACAATTCCACACCTGTAATGGCGAGGATGTTGAAAATTATTTTAATATGCAAAACTGTTACCCAATCATAGCAGTGGGCGTTTACTTCCAAGTCTTGAATGTGGCACGCCTGTCAAAACAGAGTGTTTCAAAGAGAGGGTCAAAAACATGATGGAAAATAGCCTATTACTTTAAAATTATGATTTATTTTGATGTAAAAATCTTTGTAATATTATAAGTGGACCTTAGAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274842 True 357 lncRNA 0.37 1 435089 435445

Neighbor

gene id symbol gene type direction distance location
CI01000056_00376962_00378136 ARPC4 coding upstream 56581 376962 ~ 378508 (+)
CI01000056_00349501_00362980 RAB7A, RAB7 coding upstream 72109 349501 ~ 362980 (+)
CI01000056_00256621_00277009 LRIG1 coding upstream 156694 256447 ~ 278395 (+)
CI01000056_00233785_00245058 NA coding upstream 189671 233546 ~ 245418 (+)
CI01000056_00069260_00074705 NA coding upstream 360379 68778 ~ 74710 (+)
CI01000056_00601216_00610322 TBL1XR1.S, TBL1XR1A, TBL1XR1, TBL1XR1.L coding downstream 164908 600353 ~ 610405 (+)
CI01000056_01059066_01060580 NA coding downstream 623621 1058889 ~ 1062844 (+)
CI01000056_01306290_01314471 NA coding downstream 870431 1305876 ~ 1314626 (+)
CI01000056_01714213_01714936 NA coding downstream 1278497 1713942 ~ 1714975 (+)
CI01000056_01720495_01737951 RBMS1A coding downstream 1285050 1720495 ~ 1738749 (+)
G242098 NA non-coding upstream 11405 423458 ~ 423684 (+)
G242097 NA non-coding upstream 14353 420480 ~ 420736 (+)
G242095 NA non-coding upstream 15055 419364 ~ 420034 (+)
G242092 NA non-coding upstream 19413 415477 ~ 415676 (+)
G242090 NA non-coding upstream 21087 413772 ~ 414002 (+)
G242158 NA non-coding downstream 79422 514867 ~ 515430 (+)
G242192 NA non-coding downstream 181338 616783 ~ 617152 (+)
G242611 NA non-coding downstream 431951 867396 ~ 874944 (+)
G242653 NA non-coding downstream 568324 1003769 ~ 1004087 (+)
G242656 NA non-coding downstream 570334 1005779 ~ 1006120 (+)
G241982 NA other upstream 274139 155068 ~ 160950 (+)

Expression


Co-expression Network