G242656


Basic Information

Item Value
gene id G242656
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1005779 ~ 1006120 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU275425
AAACCGTCCCATAATGGGGTGATGAATACGATCTTCAACTAGATGGAACTGGATTAAATATTTTGATTGATGCAATCCCAATCAGACTTATGACCTATAACGCTGCCTGAATCATAATCACGCACTGTTCACTGTTGGCCAGAGGAGAACTGGCCCCCCAACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTTTGTCACCTGTTGGTCACCTGATGTCACCTGTTGTCACCTGTTGGAGTTTGGGTTCCTTGCTGCTGTCGCCTTTGGCTTGCTTAGTTGTGGACACTTGATATTCAACAATCTGATTGCATTGAATTTGATCTGCCTGCATCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275425 True 342 lncRNA 0.44 1 1005779 1006120

Neighbor

gene id symbol gene type direction distance location
CI01000056_00601216_00610322 TBL1XR1.S, TBL1XR1A, TBL1XR1, TBL1XR1.L coding upstream 395374 600353 ~ 610405 (+)
CI01000056_00376962_00378136 ARPC4 coding upstream 627271 376962 ~ 378508 (+)
CI01000056_00349501_00362980 RAB7A, RAB7 coding upstream 642799 349501 ~ 362980 (+)
CI01000056_00256621_00277009 LRIG1 coding upstream 727384 256447 ~ 278395 (+)
CI01000056_00233785_00245058 NA coding upstream 760361 233546 ~ 245418 (+)
CI01000056_01059066_01060580 NA coding downstream 52946 1058889 ~ 1062844 (+)
CI01000056_01306290_01314471 NA coding downstream 299756 1305876 ~ 1314626 (+)
CI01000056_01714213_01714936 NA coding downstream 707822 1713942 ~ 1714975 (+)
CI01000056_01720495_01737951 RBMS1A coding downstream 714375 1720495 ~ 1738749 (+)
CI01000056_01749027_01767554 ITGB6 coding downstream 742756 1748876 ~ 1767853 (+)
G242653 NA non-coding upstream 1692 1003769 ~ 1004087 (+)
G242611 NA non-coding upstream 130835 867396 ~ 874944 (+)
G242192 NA non-coding upstream 388627 616783 ~ 617152 (+)
G242158 NA non-coding upstream 490349 514867 ~ 515430 (+)
G242105 NA non-coding upstream 570334 435089 ~ 435445 (+)
G242657 NA non-coding downstream 7017 1013137 ~ 1013471 (+)
G242658 NA non-coding downstream 8612 1014732 ~ 1014935 (+)
G242659 NA non-coding downstream 11902 1018022 ~ 1018294 (+)
G242661 NA non-coding downstream 14192 1020312 ~ 1020630 (+)
G242662 NA non-coding downstream 23818 1029938 ~ 1030354 (+)
G241982 NA other upstream 844829 155068 ~ 160950 (+)

Expression


Co-expression Network