Gene
RNA
| Item | Value |
|---|---|
| gene id | G242658 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000056 |
| NCBI id | null |
| chromosome length | 2086016 |
| location | 1014732 ~ 1014935 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: carboxypeptidase Z-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU275427 | True | 204 | lncRNA | 0.37 | 1 | 1014732 | 1014935 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000056_00601216_00610322 | TBL1XR1.S, TBL1XR1A, TBL1XR1, TBL1XR1.L | coding | upstream | 404327 | 600353 ~ 610405 (+) |
| CI01000056_00376962_00378136 | ARPC4 | coding | upstream | 636224 | 376962 ~ 378508 (+) |
| CI01000056_00349501_00362980 | RAB7A, RAB7 | coding | upstream | 651752 | 349501 ~ 362980 (+) |
| CI01000056_00256621_00277009 | LRIG1 | coding | upstream | 736337 | 256447 ~ 278395 (+) |
| CI01000056_00233785_00245058 | NA | coding | upstream | 769314 | 233546 ~ 245418 (+) |
| CI01000056_01059066_01060580 | NA | coding | downstream | 44131 | 1058889 ~ 1062844 (+) |
| CI01000056_01306290_01314471 | NA | coding | downstream | 290941 | 1305876 ~ 1314626 (+) |
| CI01000056_01714213_01714936 | NA | coding | downstream | 699007 | 1713942 ~ 1714975 (+) |
| CI01000056_01720495_01737951 | RBMS1A | coding | downstream | 705560 | 1720495 ~ 1738749 (+) |
| CI01000056_01749027_01767554 | ITGB6 | coding | downstream | 733941 | 1748876 ~ 1767853 (+) |
| G242657 | NA | non-coding | upstream | 1261 | 1013137 ~ 1013471 (+) |
| G242656 | NA | non-coding | upstream | 8612 | 1005779 ~ 1006120 (+) |
| G242653 | NA | non-coding | upstream | 10645 | 1003769 ~ 1004087 (+) |
| G242611 | NA | non-coding | upstream | 139788 | 867396 ~ 874944 (+) |
| G242192 | NA | non-coding | upstream | 397580 | 616783 ~ 617152 (+) |
| G242659 | NA | non-coding | downstream | 3087 | 1018022 ~ 1018294 (+) |
| G242661 | NA | non-coding | downstream | 5377 | 1020312 ~ 1020630 (+) |
| G242662 | NA | non-coding | downstream | 15003 | 1029938 ~ 1030354 (+) |
| G242663 | NA | non-coding | downstream | 16488 | 1031423 ~ 1031649 (+) |
| G242675 | NA | non-coding | downstream | 38223 | 1053158 ~ 1053383 (+) |
| G241982 | NA | other | upstream | 853782 | 155068 ~ 160950 (+) |
