CI01000057_04357565_04358136


Basic Information

Item Value
gene id CI01000057_04357565_04358136
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4357565 ~ 4359044 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_04357565_04358136.mRNA
GATCTTTATATCCGCCTCAGCGCGCGCGCTCTCTCTCTCATTCACTTCAGCCGGATACAAGCTGCATATGTGCCGCGGCGCTGGACGTTTCGTCTGTTTGTTTGCTGTGAGACGGCCATATGTCCCAGTTTCACTCCGTCTCCATCTGTACCACCTTTATTGCTGCTGAACGATGCGGAAACAGACACGGAGCTGAACTTCTGCAGTGATGGAGTGCTCGGCGCTGAGCAGGGAAGGCGCTGGTCTGGCCAAACCGCCCAAGCATCTTTGGAGGCAGCCCCGAACCCACATTCGAATCAAACAGCGGTACCACTCCGATACCGAGCGGTACCTGTGCTGTAACAGGGCCACGGAGCAGAACCGCCCAGGTCTGAAAAAACCGAGAATGTCCTGGCCCTCTTCTTTTCACAAACGGTAAATCGTATTTTAAATATGTGCCAAATGTAAATTGTTTGTAAATGCAGTAGAGGAGAGCTTCCTCATGTGAAATGACAACTTCCCCATGTGACAGTGTGAGCGGTGAAGTCAGCAAAATTGGGACACTTTTTGGTAAACTGTGTATTAAATACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_04357565_04358136.mRNA False 571 mRNA 0.50 2 4357565 4358365

Neighbor

gene id symbol gene type direction distance location
CI01000057_04218508_04219283 GA45B, GADD45B, GADD45BA coding upstream 137671 4218334 ~ 4219894 (+)
CI01000057_04202045_04205390 VMAC coding upstream 152086 4201772 ~ 4205479 (+)
CI01000057_04105710_04123101 RANBP3A, RANBP3 coding upstream 233847 4105710 ~ 4123718 (+)
CI01000057_04088057_04092278 CTNS coding upstream 265287 4088057 ~ 4092278 (+)
CI01000057_04029208_04038844 SLC1A6 coding upstream 318655 4029208 ~ 4038910 (+)
CI01000057_04364304_04364681 NA coding downstream 5589 4359098 ~ 4365796 (+)
CI01000057_04419591_04430486 PDE4C, CRTC1B coding downstream 61226 4419591 ~ 4430486 (+)
CI01000057_04443549_04450402 RAB3A, RAB3A.L, RAB3AB coding downstream 85184 4443549 ~ 4451138 (+)
CI01000057_04473417_04481843 KLHL26 coding downstream 114857 4473222 ~ 4481894 (+)
CI01000057_04491831_04508031 CRTC1 coding downstream 133466 4491831 ~ 4508535 (+)
G245586 NA non-coding upstream 94105 4263225 ~ 4263460 (+)
G245583 NA non-coding upstream 96747 4260494 ~ 4260818 (+)
G245580 NA non-coding upstream 101486 4255860 ~ 4256079 (+)
G245575 NA non-coding upstream 109794 4247475 ~ 4247771 (+)
G245569 NA non-coding upstream 117805 4239552 ~ 4239760 (+)
G245467 NA non-coding downstream 96784 4455149 ~ 4457859 (+)
G245479 NA non-coding downstream 126918 4485283 ~ 4486106 (+)
G245457 NA non-coding downstream 198344 4556709 ~ 4557013 (+)
G245464 NA non-coding downstream 222100 4580465 ~ 4583262 (+)
G245644 NA non-coding downstream 239587 4597952 ~ 4598411 (+)
G245486 NA other upstream 145484 4209897 ~ 4212081 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other upstream 512874 3842028 ~ 3844691 (+)
G245401 NA other upstream 819123 3537569 ~ 3538442 (+)
G245231 NA other upstream 1065003 3087096 ~ 3292562 (+)
G243991 NA other upstream 1705005 2635237 ~ 2652560 (+)
G245725 NA other downstream 740320 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 1215539 5564489 ~ 5579843 (+)
G245856 NA other downstream 1279289 5637654 ~ 5643340 (+)
G245857 NA other downstream 1296911 5655276 ~ 5657239 (+)
CI01000057_05912175_05916639 NA other downstream 1553448 5911767 ~ 5917211 (+)

Expression


Co-expression Network