Gene
RNA
| Item | Value |
|---|---|
| gene id | G245725 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 5098685 ~ 5103606 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278934 | False | 2738 | TUCP | 0.37 | 2 | 5098685 | 5101450 |
| TU278935 | True | 4097 | TUCP | 0.36 | 3 | 5098685 | 5103606 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_04949557_05007535 | IARS | coding | upstream | 90513 | 4949557 ~ 5008172 (+) |
| CI01000057_04842021_04842320 | NA | coding | upstream | 256353 | 4841301 ~ 4842332 (+) |
| CI01000057_04781699_04785615 | NA | coding | upstream | 313034 | 4781699 ~ 4785651 (+) |
| CI01000057_04773601_04773990 | NA | coding | upstream | 324695 | 4773396 ~ 4773990 (+) |
| CI01000057_04755505_04764341 | NA | coding | upstream | 334273 | 4755505 ~ 4764412 (+) |
| CI01000057_05119106_05161147 | ATP2B2 | coding | downstream | 15388 | 5118994 ~ 5162116 (+) |
| CI01000057_05190329_05218573 | SLC6A11 | coding | downstream | 86553 | 5190159 ~ 5218846 (+) |
| CI01000057_05263212_05269456 | SLC6A1B, SLC6A1, SLC6A1A | coding | downstream | 158265 | 5261871 ~ 5269510 (+) |
| CI01000057_05291346_05295377 | NA | coding | downstream | 185828 | 5289434 ~ 5295729 (+) |
| CI01000057_05349185_05350825 | HRH1 | coding | downstream | 244610 | 5348216 ~ 5351058 (+) |
| G245711 | NA | non-coding | upstream | 161527 | 4936665 ~ 4937158 (+) |
| G245715 | NA | non-coding | upstream | 162542 | 4935757 ~ 4936143 (+) |
| G245706 | NA | non-coding | upstream | 167510 | 4930829 ~ 4931175 (+) |
| G245705 | NA | non-coding | upstream | 171158 | 4925812 ~ 4927527 (+) |
| G245695 | NA | non-coding | upstream | 179977 | 4916751 ~ 4918708 (+) |
| G245804 | NA | non-coding | downstream | 194247 | 5297853 ~ 5298085 (+) |
| G245805 | NA | non-coding | downstream | 201129 | 5304735 ~ 5305047 (+) |
| G245730 | NA | non-coding | downstream | 353383 | 5456989 ~ 5467116 (+) |
| G245829 | NA | non-coding | downstream | 371400 | 5475006 ~ 5475281 (+) |
| G245830 | NA | non-coding | downstream | 372207 | 5475813 ~ 5476015 (+) |
| G245486 | NA | other | upstream | 886604 | 4209897 ~ 4212081 (+) |
| CI01000057_03842028_03844033 | NDUFS7.S, MGC85267, NDUFS7 | other | upstream | 1253994 | 3842028 ~ 3844691 (+) |
| G245401 | NA | other | upstream | 1560243 | 3537569 ~ 3538442 (+) |
| G245231 | NA | other | upstream | 1806123 | 3087096 ~ 3292562 (+) |
| G243991 | NA | other | upstream | 2446125 | 2635237 ~ 2652560 (+) |
| CI01000057_05564489_05579041 | NA | other | downstream | 470298 | 5564489 ~ 5579843 (+) |
| G245856 | NA | other | downstream | 534048 | 5637654 ~ 5643340 (+) |
| G245857 | NA | other | downstream | 551670 | 5655276 ~ 5657239 (+) |
| CI01000057_05912175_05916639 | NA | other | downstream | 808207 | 5911767 ~ 5917211 (+) |
