G245715


Basic Information

Item Value
gene id G245715
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4935757 ~ 4936143 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU278924
TATGAGGAATTCTTCTAATGTTGTTTCATGATTCTATTTATACTGTATATTTGGCCACAGCTGGACCTTCGTCAACTCCGTCAATATTTGTCAACTTCATCAGGATTTGTCAACATCATCAGTATTTAGCACGTCAGTTTTTGTCAACACCGGCAGGATCTGTCAACACCGGCAGGATTTGTCAACTCCGGCAGGATTCATCAACACCATCAGGATTTGTCAATACCATCAGGAATTGTCAACTCCGGCAGTATTTTTCAACTCCGGCAGTATTTGTCAACTCCGGCAGTTGAAGGTTTTTTTTAATTTTGAAAGATATGTCTTATTCTTTTTTCAATCTATTGTGTTAAAATATTAAAACATCAACTGAACTACATGATATAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278924 True 387 lncRNA 0.37 1 4935757 4936143

Neighbor

gene id symbol gene type direction distance location
CI01000057_04842021_04842320 NA coding upstream 93425 4841301 ~ 4842332 (+)
CI01000057_04781699_04785615 NA coding upstream 150106 4781699 ~ 4785651 (+)
CI01000057_04773601_04773990 NA coding upstream 161767 4773396 ~ 4773990 (+)
CI01000057_04755505_04764341 NA coding upstream 171345 4755505 ~ 4764412 (+)
CI01000057_04737652_04740503 METTL21B coding upstream 194776 4737652 ~ 4740981 (+)
CI01000057_04949557_05007535 IARS coding downstream 13414 4949557 ~ 5008172 (+)
CI01000057_05089046_05116009 NA coding downstream 152116 5088259 ~ 5116074 (+)
CI01000057_05119106_05161147 ATP2B2 coding downstream 182851 5118994 ~ 5162116 (+)
CI01000057_05190329_05218573 SLC6A11 coding downstream 254016 5190159 ~ 5218846 (+)
CI01000057_05263212_05269456 SLC6A1B, SLC6A1, SLC6A1A coding downstream 325728 5261871 ~ 5269510 (+)
G245706 NA non-coding upstream 4582 4930829 ~ 4931175 (+)
G245705 NA non-coding upstream 8230 4925812 ~ 4927527 (+)
G245695 NA non-coding upstream 17049 4916751 ~ 4918708 (+)
G245692 NA non-coding upstream 19112 4912736 ~ 4916645 (+)
G245703 NA non-coding upstream 24878 4903293 ~ 4910879 (+)
G245711 NA non-coding downstream 522 4936665 ~ 4937158 (+)
G245804 NA non-coding downstream 361710 5297853 ~ 5298085 (+)
G245805 NA non-coding downstream 368592 5304735 ~ 5305047 (+)
G245730 NA non-coding downstream 520846 5456989 ~ 5467116 (+)
G245829 NA non-coding downstream 538863 5475006 ~ 5475281 (+)
G245486 NA other upstream 723676 4209897 ~ 4212081 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other upstream 1091066 3842028 ~ 3844691 (+)
G245401 NA other upstream 1397315 3537569 ~ 3538442 (+)
G245231 NA other upstream 1643195 3087096 ~ 3292562 (+)
G243991 NA other upstream 2283197 2635237 ~ 2652560 (+)
G245725 NA other downstream 162542 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 637761 5564489 ~ 5579843 (+)
G245856 NA other downstream 701511 5637654 ~ 5643340 (+)
G245857 NA other downstream 719133 5655276 ~ 5657239 (+)
CI01000057_05912175_05916639 NA other downstream 975670 5911767 ~ 5917211 (+)

Expression


Co-expression Network