CI01000057_04781699_04785615


Basic Information

Item Value
gene id CI01000057_04781699_04785615
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4781699 ~ 4785651 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_04781699_04785615.mRNA
ATGAACGCGATCCGCTGGACTGTCAGGAGAGCCGCTAGTCACGTGTTTATAAATAAAGACTATCTGATGAAGAAGATGCGGATCGGGACTCATAACGGCACCTTTCACTGTGATGAAGTTCTGGCGTGTTTCTTTCTGCGACAGCTGCCAGAGTACAAGGATGCTGAGATCGTCCGCAGCAGAGACTCTTCTGTCCTGGCCGAGTGTGATGTTGTGGTGGATGTTGGTGGAGAGTTTGATCCCAGTCATCAGCGATACGATCATCATCAAAGATCTTTTGTGGAAAGTTTCCATAGCTTGTGTCCAGAGAAGCCATGGGTGACGAAGTTGAGCTCGGCAGGTTTGATTTACCTTCATTTCGGCAGACGAGTTCTTGCCCAGCTGACCCAGCTGAAGCAGGACGACACGCGGCTGGAGGTCCTTTATGACAAGATGTATGAGAACTTTGTGGAGGAAGTGGATGCAGTGGATAATGGGATCTGTCAGTGTGACGGAGAGGCGCGTTACTCCATGACCACCACCCTCAGCGCTCGCGTCGGCCATCTCAACCCGCACTGGAACAGCAAAGACCAGAACACCGAGGAGGGTTTCCATAAAGCCCTGGCTCTTGTAGGAGTTGAGTTCCAGGACCGTTTGGATTACTACATGAACGCCTGGCTCCCGGCGAGAGAGATCGTGCAACAAGCTGTTCAGACGAGATATCAGGTGGATCCGAGCGGGGAGATCGTGTTGCTGGCTCAGGGCGGTTGTCCTTGGAAAGAGCATCTGTTTGCCCTGGAGAAGGAGATGAAGGTGGACGTGCCCATTAAGTTTGTGCTGTACACGGATCAAAATGGCCACTGGAGAGTCCAGTGTGTCCCGGCGGGACTGAACACCTTTCAGAACAGGTTGAGTATTTTGGAGGAATGGCGAGGCGTCCGGGACGAAGCGCTGTCCGAGCTGAGTGGAATTCCTGGCTGCATCTTCGTTCATGCCAGTGGTTTCATTGGGGGGAACAAGACGCAGGAGGGCGCTCTGGAAATAGCCAAAAGAACGCTTCAAACGGCACCCAAACCTTTACCCAGCAACTGACACGTACCTGTAATTCACCTGCTCTCATGAAAACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_04781699_04785615.mRNA True 1107 mRNA 0.52 7 4781699 4785651

Neighbor

gene id symbol gene type direction distance location
CI01000057_04773601_04773990 NA coding upstream 7709 4773396 ~ 4773990 (+)
CI01000057_04755505_04764341 NA coding upstream 17287 4755505 ~ 4764412 (+)
CI01000057_04737652_04740503 METTL21B coding upstream 40718 4737652 ~ 4740981 (+)
CI01000057_04703416_04711776 CYP27B1 coding upstream 69766 4703353 ~ 4711933 (+)
CI01000057_04684204_04698051 METTL1, METTL1-B coding upstream 83648 4684204 ~ 4698051 (+)
CI01000057_04842021_04842320 NA coding downstream 55650 4841301 ~ 4842332 (+)
CI01000057_04949557_05007535 IARS coding downstream 163906 4949557 ~ 5008172 (+)
CI01000057_05089046_05116009 NA coding downstream 302608 5088259 ~ 5116074 (+)
CI01000057_05119106_05161147 ATP2B2 coding downstream 333343 5118994 ~ 5162116 (+)
CI01000057_05190329_05218573 SLC6A11 coding downstream 404508 5190159 ~ 5218846 (+)
G245678 NA non-coding upstream 698 4780418 ~ 4781001 (+)
G245671 NA non-coding upstream 31640 4749807 ~ 4750059 (+)
G245483 NA non-coding upstream 79551 4699504 ~ 4702148 (+)
G245654 NA non-coding upstream 126348 4654840 ~ 4655351 (+)
G245653 NA non-coding upstream 127680 4653783 ~ 4654019 (+)
G245681 NA non-coding downstream 7338 4792989 ~ 4794717 (+)
G245703 NA non-coding downstream 117642 4903293 ~ 4910879 (+)
G245692 NA non-coding downstream 127085 4912736 ~ 4916645 (+)
G245695 NA non-coding downstream 131100 4916751 ~ 4918708 (+)
G245705 NA non-coding downstream 140161 4925812 ~ 4927527 (+)
G245486 NA other upstream 569618 4209897 ~ 4212081 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other upstream 937008 3842028 ~ 3844691 (+)
G245401 NA other upstream 1243257 3537569 ~ 3538442 (+)
G245231 NA other upstream 1489137 3087096 ~ 3292562 (+)
G243991 NA other upstream 2129139 2635237 ~ 2652560 (+)
G245725 NA other downstream 313034 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 788253 5564489 ~ 5579843 (+)
G245856 NA other downstream 852003 5637654 ~ 5643340 (+)
G245857 NA other downstream 869625 5655276 ~ 5657239 (+)
CI01000057_05912175_05916639 NA other downstream 1126162 5911767 ~ 5917211 (+)

Expression


Co-expression Network