G245678


Basic Information

Item Value
gene id G245678
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4780418 ~ 4781001 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU278879
CTTTTATTATGTCACAGTCGCCGGCGCCGCTTTCGCTTCCGCTTTTACGGTCATGAGTATGAGGTAACGCAGCTCTGTTTATCATTTTAGATACATTTGAGAGTGTTGAAAATGATGTTATAACGTTACTCTGTGCGTTCGCTCGGCGGCTGCTGTGAGACACTGTTACACACTGCAGTAAGATAGATCGATTTTAGAATATCATATTAAATGCTGGATGGCTTGTGTTGATAAATGGCATGCAATTAATTTTAAAACGTATTGTATGATGGAAAAAATGCTGTATTACTGCTACTAAAAATAAAGCTGCATCTGATTATGCTATGTTAGCTACTTGACAAAATAGTGTTTTTCTCTGAGGCATGGTAAAGCATGGTACTCACAAAAAAATCAAGAAAATTAGATTCAAGACTAAACGTGTTGAGCTATATAACAATAATTAGTTTTCTGTCTATAAATATATCAAAACAGTTGTTCCCTTGCCTATTAAAACATGTAAATATTAAAGCGTCTTTGGTGTTTCCATGGTTTCTACAAAATAAAACCGGAAACCGAGGGTAACGCGGGTATGACGCAATTGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278879 True 584 lncRNA 0.36 1 4780418 4781001

Neighbor

gene id symbol gene type direction distance location
CI01000057_04773601_04773990 NA coding upstream 6428 4773396 ~ 4773990 (+)
CI01000057_04755505_04764341 NA coding upstream 16006 4755505 ~ 4764412 (+)
CI01000057_04737652_04740503 METTL21B coding upstream 39437 4737652 ~ 4740981 (+)
CI01000057_04703416_04711776 CYP27B1 coding upstream 68485 4703353 ~ 4711933 (+)
CI01000057_04684204_04698051 METTL1, METTL1-B coding upstream 82367 4684204 ~ 4698051 (+)
CI01000057_04781699_04785615 NA coding downstream 698 4781699 ~ 4785651 (+)
CI01000057_04842021_04842320 NA coding downstream 60300 4841301 ~ 4842332 (+)
CI01000057_04949557_05007535 IARS coding downstream 168556 4949557 ~ 5008172 (+)
CI01000057_05089046_05116009 NA coding downstream 307258 5088259 ~ 5116074 (+)
CI01000057_05119106_05161147 ATP2B2 coding downstream 337993 5118994 ~ 5162116 (+)
G245671 NA non-coding upstream 30359 4749807 ~ 4750059 (+)
G245483 NA non-coding upstream 78270 4699504 ~ 4702148 (+)
G245654 NA non-coding upstream 125067 4654840 ~ 4655351 (+)
G245653 NA non-coding upstream 126399 4653783 ~ 4654019 (+)
G245652 NA non-coding upstream 126772 4653407 ~ 4653646 (+)
G245681 NA non-coding downstream 11988 4792989 ~ 4794717 (+)
G245703 NA non-coding downstream 122292 4903293 ~ 4910879 (+)
G245692 NA non-coding downstream 131735 4912736 ~ 4916645 (+)
G245695 NA non-coding downstream 135750 4916751 ~ 4918708 (+)
G245705 NA non-coding downstream 144811 4925812 ~ 4927527 (+)
G245486 NA other upstream 568337 4209897 ~ 4212081 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other upstream 935727 3842028 ~ 3844691 (+)
G245401 NA other upstream 1241976 3537569 ~ 3538442 (+)
G245231 NA other upstream 1487856 3087096 ~ 3292562 (+)
G243991 NA other upstream 2127858 2635237 ~ 2652560 (+)
G245725 NA other downstream 317684 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 792903 5564489 ~ 5579843 (+)
G245856 NA other downstream 856653 5637654 ~ 5643340 (+)
G245857 NA other downstream 874275 5655276 ~ 5657239 (+)
CI01000057_05912175_05916639 NA other downstream 1130812 5911767 ~ 5917211 (+)

Expression


Co-expression Network