CI01000057_04684204_04698051 (METTL1, METTL1-B)


Basic Information

Item Value
gene id CI01000057_04684204_04698051
gene name METTL1, METTL1-B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4684204 ~ 4698051 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_04684204_04698051.mRNA
ATGAGTGTGTCGATGCCTCAGAAGCGCTATTACCGGCAGAGAGCGCACTCCAACCCCATGGCCGACCACACGTTTCAGTATCCGGTTTGCCCGGAGGAGATGGACTGGTCTCCGCTTTACCCGCAGTATTTTCCGCACCTGGAGGGAAACGGGAGTCCGGAGAAGCTCGACGCGCAGGTGGAGTTCGCGGACATCGGCTGCGGCTACGGCGGACTTCTGGTTCAGTTATCAGATCTCTTCCCAAACCAGCTGATTTTGGGCTTGGAGATTCGGGTGAAAGTGTCTGACTATGTGCAGGACCGCATTCGCTCCCTTCGAGCGGCTGAGCCGGGCCGGTACCAGAACATCGCCTGCCTCCGCAGCAACGCCATGAAGTACCTGCCTAATTTCTTCAAAAAGGGACAGCTCAGTAAGATGTTCTTTCTCTTTCCGGATCCACACTTCAAGAAAACCAAACACAAATGGCGCATTATTAGCCCTACATTGCTGGCGGAGTATGCGTACACGCTCCGAGTTGGGGGTTTAGTGTACACAAACACTGATGTGGAAGAGGTGCACGAATGGATCGTCAAACACTTCAGCGATCATCCTCTCTTCAGCAGAGTGTCGGAGGAACAGCTGGCTGATGACATGATCATTAGTCATCTGGGAACATGCACAGAAGAGGGAAAGAAGGTTCAGAGAAATGGAGGCAAAAATTTTTTAGCAGTTTTCCGCAGAGTGGAAGATCCCCAGACG

Function

symbol description
mettl1 Predicted to enable tRNA (guanine-N7-)-methyltransferase activity. Predicted to be involved in RNA (guanine-N7)-methylation and tRNA methylation. Predicted to act upstream of or within methylation and tRNA processing. Predicted to be located in nucleus. Predicted to be part of tRNA methyltransferase complex. Orthologous to human METTL1 (methyltransferase 1, tRNA methylguanosine).

GO:

id name namespace
GO:0000049 tRNA binding molecular_function

KEGG:

id description
K03439 trmB, METTL1, TRM8; tRNA (guanine-N7-)-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_04684204_04698051.mRNA True 738 mRNA 0.53 6 4684204 4698051

Neighbor

gene id symbol gene type direction distance location
CI01000057_04644947_04646881 NA coding upstream 37191 4644947 ~ 4647013 (+)
CI01000057_04612115_04631293 RAF1, RAF1B coding upstream 52333 4611854 ~ 4631871 (+)
CI01000057_04601541_04604168 NA coding upstream 79785 4601170 ~ 4604419 (+)
CI01000057_04547933_04555967 RAB43 coding upstream 128216 4547757 ~ 4555988 (+)
CI01000057_04491831_04508031 CRTC1 coding upstream 175669 4491831 ~ 4508535 (+)
CI01000057_04703416_04711776 CYP27B1 coding downstream 5302 4703353 ~ 4711933 (+)
CI01000057_04737652_04740503 METTL21B coding downstream 39601 4737652 ~ 4740981 (+)
CI01000057_04755505_04764341 NA coding downstream 57454 4755505 ~ 4764412 (+)
CI01000057_04773601_04773990 NA coding downstream 75345 4773396 ~ 4773990 (+)
CI01000057_04781699_04785615 NA coding downstream 83648 4781699 ~ 4785651 (+)
G245654 NA non-coding upstream 28853 4654840 ~ 4655351 (+)
G245653 NA non-coding upstream 30185 4653783 ~ 4654019 (+)
G245652 NA non-coding upstream 30558 4653407 ~ 4653646 (+)
G245644 NA non-coding upstream 85793 4597952 ~ 4598411 (+)
G245464 NA non-coding upstream 100942 4580465 ~ 4583262 (+)
G245483 NA non-coding downstream 1453 4699504 ~ 4702148 (+)
G245671 NA non-coding downstream 51756 4749807 ~ 4750059 (+)
G245678 NA non-coding downstream 82367 4780418 ~ 4781001 (+)
G245681 NA non-coding downstream 94938 4792989 ~ 4794717 (+)
G245703 NA non-coding downstream 205242 4903293 ~ 4910879 (+)
G245486 NA other upstream 472123 4209897 ~ 4212081 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other upstream 839513 3842028 ~ 3844691 (+)
G245401 NA other upstream 1145762 3537569 ~ 3538442 (+)
G245231 NA other upstream 1391642 3087096 ~ 3292562 (+)
G243991 NA other upstream 2031644 2635237 ~ 2652560 (+)
G245725 NA other downstream 400634 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 875853 5564489 ~ 5579843 (+)
G245856 NA other downstream 939603 5637654 ~ 5643340 (+)
G245857 NA other downstream 957225 5655276 ~ 5657239 (+)
CI01000057_05912175_05916639 NA other downstream 1213762 5911767 ~ 5917211 (+)

Expression


Co-expression Network