G245804


Basic Information

Item Value
gene id G245804
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5297853 ~ 5298085 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU279017
GCCACTGTTCTTATTGACAGTCTTCATGCAATGCATTAAAATGTTGTCGTATTTGCAATGCTTTGACCGTTCTCTGTAGATCCAGCCTTCTCGCAAGCCACGATTGGTTGATTATGTATAATGCACGCTATTGGTCAAATTATTTTTCAGTCATTACCTTCCGCAAATATGAAAACAAAACCAAAACTGGGACATTTTATGCAACTTAGAAATCCTGGACAGGACGCGTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279017 True 233 lncRNA 0.40 1 5297853 5298085

Neighbor

gene id symbol gene type direction distance location
CI01000057_05291346_05295377 NA coding upstream 2124 5289434 ~ 5295729 (+)
CI01000057_05263212_05269456 SLC6A1B, SLC6A1, SLC6A1A coding upstream 28343 5261871 ~ 5269510 (+)
CI01000057_05190329_05218573 SLC6A11 coding upstream 79007 5190159 ~ 5218846 (+)
CI01000057_05119106_05161147 ATP2B2 coding upstream 135737 5118994 ~ 5162116 (+)
CI01000057_05089046_05116009 NA coding upstream 181779 5088259 ~ 5116074 (+)
CI01000057_05349185_05350825 HRH1 coding downstream 50131 5348216 ~ 5351058 (+)
CI01000057_05357955_05399136 ATG7 coding downstream 58822 5356907 ~ 5399252 (+)
CI01000057_05503547_05504435 NA coding downstream 204670 5502755 ~ 5504529 (+)
CI01000057_05535136_05545646 NA coding downstream 235566 5533651 ~ 5547218 (+)
CI01000057_05564489_05579041 NA coding downstream 266404 5564489 ~ 5579843 (+)
G245711 NA non-coding upstream 360695 4936665 ~ 4937158 (+)
G245715 NA non-coding upstream 361710 4935757 ~ 4936143 (+)
G245706 NA non-coding upstream 366678 4930829 ~ 4931175 (+)
G245705 NA non-coding upstream 370326 4925812 ~ 4927527 (+)
G245695 NA non-coding upstream 379145 4916751 ~ 4918708 (+)
G245805 NA non-coding downstream 6650 5304735 ~ 5305047 (+)
G245730 NA non-coding downstream 158904 5456989 ~ 5467116 (+)
G245829 NA non-coding downstream 176921 5475006 ~ 5475281 (+)
G245830 NA non-coding downstream 177728 5475813 ~ 5476015 (+)
G245833 NA non-coding downstream 185649 5483734 ~ 5483962 (+)
G245725 NA other upstream 194247 5098685 ~ 5103606 (+)
G245486 NA other upstream 1085772 4209897 ~ 4212081 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other upstream 1453162 3842028 ~ 3844691 (+)
G245401 NA other upstream 1759411 3537569 ~ 3538442 (+)
G245231 NA other upstream 2005291 3087096 ~ 3292562 (+)
G245856 NA other downstream 339569 5637654 ~ 5643340 (+)
G245857 NA other downstream 357191 5655276 ~ 5657239 (+)
CI01000057_05912175_05916639 NA other downstream 613728 5911767 ~ 5917211 (+)

Expression


Co-expression Network