G245829


Basic Information

Item Value
gene id G245829
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5475006 ~ 5475281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU279043
GTCTCTTTGCCCCGCCCTCAATCACTGTAGTTGTATCTGAGACTGGAAGAGTTTGGTTCGTGTTGTTCATGTCGAGAAGACGCTGTTTTCTGCTGCCAAAGCAAATCCACTTTGATGAGATTGATACGGTAAAACCCACGCCATCGTTACTGTTCGTATCACTGTGAATCAAGAGCTGAGATTCAGATATGATAATGAGCGTTTGGTTTCTGACCAATCAGAGCAGAGCAGCTCTCAGAAAGGCGGGGTTTAGAGAGAGCGAATCCTTGATGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279043 True 276 lncRNA 0.46 1 5475006 5475281

Neighbor

gene id symbol gene type direction distance location
CI01000057_05357955_05399136 ATG7 coding upstream 75754 5356907 ~ 5399252 (+)
CI01000057_05349185_05350825 HRH1 coding upstream 123948 5348216 ~ 5351058 (+)
CI01000057_05291346_05295377 NA coding upstream 179277 5289434 ~ 5295729 (+)
CI01000057_05263212_05269456 SLC6A1B, SLC6A1, SLC6A1A coding upstream 205496 5261871 ~ 5269510 (+)
CI01000057_05190329_05218573 SLC6A11 coding upstream 256160 5190159 ~ 5218846 (+)
CI01000057_05503547_05504435 NA coding downstream 27474 5502755 ~ 5504529 (+)
CI01000057_05535136_05545646 NA coding downstream 58370 5533651 ~ 5547218 (+)
CI01000057_05564489_05579041 NA coding downstream 89208 5564489 ~ 5579843 (+)
CI01000057_05596837_05615278 PPARG coding downstream 121556 5596837 ~ 5616010 (+)
CI01000057_05626464_05631670 NA coding downstream 151183 5626464 ~ 5631801 (+)
G245730 NA non-coding upstream 7890 5456989 ~ 5467116 (+)
G245805 NA non-coding upstream 169959 5304735 ~ 5305047 (+)
G245804 NA non-coding upstream 176921 5297853 ~ 5298085 (+)
G245711 NA non-coding upstream 537848 4936665 ~ 4937158 (+)
G245715 NA non-coding upstream 538863 4935757 ~ 4936143 (+)
G245830 NA non-coding downstream 532 5475813 ~ 5476015 (+)
G245833 NA non-coding downstream 8453 5483734 ~ 5483962 (+)
G245834 NA non-coding downstream 8923 5484204 ~ 5484411 (+)
G245843 NA non-coding downstream 31698 5506979 ~ 5523069 (+)
G245725 NA other upstream 371400 5098685 ~ 5103606 (+)
G245486 NA other upstream 1262925 4209897 ~ 4212081 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other upstream 1630315 3842028 ~ 3844691 (+)
G245401 NA other upstream 1936564 3537569 ~ 3538442 (+)
G245231 NA other upstream 2182444 3087096 ~ 3292562 (+)
G245856 NA other downstream 162373 5637654 ~ 5643340 (+)
G245857 NA other downstream 179995 5655276 ~ 5657239 (+)
CI01000057_05912175_05916639 NA other downstream 436532 5911767 ~ 5917211 (+)

Expression


Co-expression Network