Gene
RNA
| Item | Value |
|---|---|
| gene id | G244606 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 1196572 ~ 1196835 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU277657 | True | 264 | lncRNA | 0.30 | 1 | 1196572 | 1196835 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_01189209_01190703 | SMUG1 | coding | downstream | 5869 | 1188913 ~ 1190703 (-) |
| CI01000057_01145522_01147560 | NA | coding | downstream | 48800 | 1144062 ~ 1147772 (-) |
| CI01000057_01083731_01092073 | NA | coding | downstream | 103941 | 1083714 ~ 1092631 (-) |
| CI01000057_00956994_00965947 | NR1D4B | coding | downstream | 230625 | 955633 ~ 965947 (-) |
| CI01000057_00938618_00949690 | NA | coding | downstream | 246793 | 938071 ~ 949779 (-) |
| CI01000057_01219430_01223491 | HNRNPA1, HNRNPA1A | coding | upstream | 22595 | 1219430 ~ 1223491 (-) |
| CI01000057_01235433_01244747 | NA | coding | upstream | 38342 | 1235177 ~ 1245182 (-) |
| CI01000057_01252690_01256408 | ZNF740A | coding | upstream | 55812 | 1252647 ~ 1256408 (-) |
| CI01000057_01261251_01262315 | NA | coding | upstream | 63851 | 1260686 ~ 1262315 (-) |
| CI01000057_01356170_01359401 | NA | coding | upstream | 158574 | 1355409 ~ 1359970 (-) |
| G244558 | NA | non-coding | downstream | 3333 | 1192945 ~ 1193239 (-) |
| G244594 | NA | non-coding | downstream | 29080 | 1165176 ~ 1167492 (-) |
| G244524 | NA | non-coding | downstream | 167544 | 1008238 ~ 1029028 (-) |
| G244522 | NA | non-coding | downstream | 195225 | 1001123 ~ 1001347 (-) |
| G244516 | NA | non-coding | downstream | 244565 | 951714 ~ 952007 (-) |
| G244548 | NA | non-coding | upstream | 11663 | 1208498 ~ 1210749 (-) |
| G244610 | NA | non-coding | upstream | 66192 | 1263027 ~ 1263250 (-) |
| G244616 | NA | non-coding | upstream | 87293 | 1284128 ~ 1284855 (-) |
| G244618 | NA | non-coding | upstream | 89247 | 1286082 ~ 1286340 (-) |
| G244619 | NA | non-coding | upstream | 90212 | 1287047 ~ 1287383 (-) |
| G244358 | NA | other | downstream | 625544 | 570530 ~ 571028 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | upstream | 604749 | 1801528 ~ 1806454 (-) |
| CI01000057_01904867_01921400 | NA | other | upstream | 723221 | 1904533 ~ 1921905 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | upstream | 2694900 | 3887203 ~ 3892054 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | upstream | 3731909 | 4927533 ~ 4931420 (-) |
| G246780 | NA | other | upstream | 4014275 | 5086312 ~ 5283617 (-) |
