CI01000062_04011834_04018478


Basic Information

Item Value
gene id CI01000062_04011834_04018478
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 4011834 ~ 4018478 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_04011834_04018478.mRNA
GTTATGGAGCTGCATGAAGTCTGAAGGTGGGCAGCTTAAGTTTGGTGCATTACTAATGCAGCAGGCTGATGTGTCTGCTCTGTGTCTGATCGAGGCTTTGACGCTCAGCCTTCCTCAGAGTCTACTGCAGACCTACAGTTTATTCACGCTTCACCCTGGCTTTCTGTCACCAGTGGCTTTATGTGTCGGGCTGAGTCTGCTGAATGTGTCCTGGTTTCTGGTCCTGTTCAGCCGTTCATGCTTTCTGCTCCGTCCTGGACACCTGCACATGACTCCTGCTGCAATGCTGTGCCAGCTCATATGGAGAGGGGGCATGCTGGGTGCCAGGGTGGCCAGCCTTATGTTCTTCTGCAGTGCGTTTCACTGGTGGTTCTCTGGAGTCGTGGGTTTCCACTGGCTCATTATGACATTCTGGCAAGTGTCCCAGCAGACAGACATCTGCATTAACCGTAGTTCCTGGCGTCTCTTCAACTTAATCTTGGGGGCTATGCATGTTTTCCTGTTCCTTAATGTTAAAGACGGTCCCTCGCGGTACCGCATGACTGGGTTCTATTTGTTAATGTTGCTGGAGAACACGTTCCTTCTGCTTCTGGCGTCGGACTCGCTCAGGAAGCCTTCATGGGACAGCATGAGTATTCCTGTGGCTGTCTTATGCAGCTTCTTTATCGGTGTCATTTTTGTTGTTCTTTACTACCGATTTCTTCATCCAAAATCCACTGAGATCCTCCAGAGTCTGAGACTCCAAATGAGCTTGACAACAGTTGACAGAACAACGGATGGAGACTGCAAGGACACGACACTTGAATCCTCCACACACAATCATGGCACTTTCTCAGTGACCGATTTTGCTTCTGTGAAACATGCAGGAGGCTGTTCTGATCAGCCTCTAGAGGGCGACTGGCACCATCATCGTATGTTAATACACCTGGCTCTTAAAACTGGAAACACAGACAAGATCAACTGCCTTTATGGAGACAGAGGGCTTTCAGTCATCCTTGGGAATGATGATGCACCTGACACAGACTCTGGAGGGAACTGTTGTAACCAGCCCTCAGTGGAAGCAGGTGAACGATCTGAAAGCTGTCCGGTTGAAAACAGAGAGGGGTTTTCTGGTGCTGAAGTCAGACAGCAGTCTCCAGAGAAGGGTGGGGTGTATGACACCTGTCCCGCAGACTGCAGTAGTACTGTTTACTTCAGTGCAGAACCCCACTCCTCTTATAGTGTTGGCGATTCTACCTTAGATAAAGAGAATATGGCTGTGATCAGTCCCATTATGAATGGAGCTGCACTGATCTTGACTGCTAAACAGCTGTTAAACAGGAACCCATGTTATACCTCAACTCCAATACCAGACCTCAAAACAATGCACAGTACAAGTCCTCGATTAGCAGGGGCTCGAAGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_04011834_04018478.mRNA True 1405 mRNA 0.49 5 4011834 4018478

Neighbor

gene id symbol gene type direction distance location
CI01000062_04010092_04010726 NA coding upstream 1086 4009311 ~ 4010748 (+)
CI01000062_04000935_04003736 NA coding upstream 7629 4000935 ~ 4004205 (+)
CI01000062_03957204_03981763 KCNK2 coding upstream 29922 3956792 ~ 3981912 (+)
CI01000062_03927588_03933449 NA coding upstream 77802 3927588 ~ 3934032 (+)
CI01000062_03904672_03920716 NA coding upstream 91081 3903987 ~ 3920753 (+)
CI01000062_04121615_04144068 GRHL1 coding downstream 103137 4121615 ~ 4145488 (+)
CI01000062_04160274_04162768 KLF11B coding downstream 141796 4160274 ~ 4163440 (+)
CI01000062_04184671_04191613 NA coding downstream 166193 4184671 ~ 4191677 (+)
G260905 NA non-coding upstream 3647 4006648 ~ 4008187 (+)
G260902 NA non-coding upstream 6701 3983635 ~ 4005133 (+)
G260908 NA non-coding upstream 11181 3999432 ~ 4000653 (+)
G260892 NA non-coding upstream 124903 3886637 ~ 3886931 (+)
G260795 NA non-coding upstream 172388 3838254 ~ 3839446 (+)
G260901 NA non-coding downstream 16901 4035379 ~ 4070400 (+)
G260904 NA non-coding downstream 62074 4080552 ~ 4082535 (+)
G260972 NA non-coding downstream 68325 4086803 ~ 4087113 (+)
G260974 NA non-coding downstream 71326 4089804 ~ 4090008 (+)
G260975 NA non-coding downstream 71779 4090257 ~ 4090510 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012222 xkr5b coding NC_007128.7 CM002901.2 32608010 ~ 32621103 (-)