G274716


Basic Information

Item Value
gene id G274716
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3760901 ~ 3761638 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311679
CGCATAAACAAAACACGACGCCTCCGTCGACTGTGTTAGTGTGTTTTGTTAAATTGCTGACAATAGTGTGTTTTGTCACTGTAATATTAGTTTGGTCACAATAACGGATACCAAACACGAGAGACGCCAGAACGTCGCTATGGTTTCCAAGCTGTCAATCATCGCATTTTCGAGACTGAGTCGTGTTCCGTACACACATGTAATGATAATTTAGGGGATTCACTCCCGCATTTAAATGCGGTTGTCACTCCTGAAACTTACAGTGTGTACGTGGCCAATGTCTTCACAGAAAAGGATCGCAGTCCGGACAGGTAGATTTGATTGAGGGCTTGGTAGGACAGATGCAGGTTGATCCCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311679 True 359 lncRNA 0.45 2 3760901 3761638

Neighbor

gene id symbol gene type direction distance location
CI01000069_03643296_03647762 SYT13, SYT5B, SYT5A coding upstream 113115 3643155 ~ 3647786 (+)
CI01000069_03636156_03639756 NA coding upstream 120916 3635980 ~ 3639985 (+)
CI01000069_03631837_03632897 NA coding upstream 127938 3631837 ~ 3632963 (+)
CI01000069_03625937_03626925 NA coding upstream 133740 3625937 ~ 3627161 (+)
CI01000069_03612923_03614657 NA coding upstream 146162 3612717 ~ 3614739 (+)
CI01000069_03766564_03767936 NA coding downstream 4926 3766564 ~ 3768198 (+)
CI01000069_03812664_03832205 AP2A1 coding downstream 51026 3812664 ~ 3832279 (+)
CI01000069_03835903_03837843 NA coding downstream 74265 3835903 ~ 3838319 (+)
CI01000069_03839830_03843013 RRAS coding downstream 78192 3839830 ~ 3843569 (+)
CI01000069_03845642_03851052 PRRG2 coding downstream 84004 3845642 ~ 3851213 (+)
G274715 NA non-coding upstream 23368 3737265 ~ 3737533 (+)
G274651 NA non-coding upstream 29318 3728882 ~ 3731583 (+)
G274601 NA non-coding upstream 102466 3658230 ~ 3658435 (+)
G274564 NA non-coding upstream 304691 3452564 ~ 3456210 (+)
G274592 NA non-coding upstream 338397 3420898 ~ 3422504 (+)
G274721 NA non-coding downstream 11456 3773094 ~ 3773544 (+)
G274628 NA non-coding downstream 29868 3791506 ~ 3796972 (+)
G274731 NA non-coding downstream 35930 3797568 ~ 3797875 (+)
G274733 NA non-coding downstream 42978 3804616 ~ 3807059 (+)
G274737 NA non-coding downstream 112138 3873776 ~ 3873980 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 866013 2893418 ~ 2894947 (+)
G274270 NA other upstream 1079743 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1588708 2031954 ~ 2040427 (+)
G273359 NA other upstream 3281820 477727 ~ 479081 (+)
G274603 NA other downstream 38385 3800023 ~ 3803501 (+)
G274619 NA other downstream 367490 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 793671 4555269 ~ 4558480 (+)
G274953 NA other downstream 1162829 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1284589 5045967 ~ 5049408 (+)

Expression


Co-expression Network