CI01000069_03612923_03614657


Basic Information

Item Value
gene id CI01000069_03612923_03614657
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3612717 ~ 3614739 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03612923_03614657.mRNA
GTATATAAGACAGATGCGCACCTTCATTTCACTCACAGCTTCAGGAAGATCAGAATAGGTTCTTGCTTCAACAGTGATTGAACGGAACTTCGATCTTTATTTAAATCTATTTAAATTTCTTATTTATTTTGCATCAACGTTGTGATAAAAAAAAAAAAAAAAAAAAAACCGCTGAAATGGAGACTTCTCAGATTCGCCAGAACTACGACCGCGACTGCGAGGCTTTGATCAACAAGATGATCAATCTGGAGCTTTACGCTTCCTACACTTACACTTCAATGGCAATTACATTATTATTCGATTTTGTTCAGGCTTTTTACTTCAAACGGGATGATGTGGCTCTTCCTGGTTTTGCCAAGTTCTTCAAGGAGAACAGTGAGGAGGAGCGCGAGCATGCCGAGAAATTCATGGAGTTCCAGAATAAGAGGGGTGGAAAAATTGTCCTTCAGGACATAAAGAAACCGGAGCGTGATATGTGGGGCAATGGACTGATCGCTATGCAGTGCGCTCTTCAGCTGGAGAAGAACGTCAACCAGGCTCTGCTGGACCTGCATAAAGCTGCCTCTGAGAAGGGAGACCCTCATATGTGTGACTTTCTGGAGACTCACTACCTGAATGAGCAGGTTGAGGCCATCAAGAAGCTTGGTGACCACATCACCAACCTTTCCAAGATGGATGCTGGCAACAACAGGATGGCAGAGTACCTGTTTGACAAGCACACCCTGGAAAGCTAAATGCAGCTCTAAGATCATCTTACGTGAAGAAATCATCAAGCTTGTTTTTTGTTATATGGTTACATCTAGTAAATGTCATATA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K00522 FTH1; ferritin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03612923_03614657.mRNA False 816 mRNA 0.42 4 3612747 3614739

Neighbor

gene id symbol gene type direction distance location
CI01000069_03595904_03596883 NA coding upstream 15647 3595726 ~ 3597100 (+)
CI01000069_03585382_03594261 ALDH16A1 coding upstream 18311 3585296 ~ 3594436 (+)
CI01000069_03509187_03563871 KCNC3A coding upstream 48387 3508902 ~ 3564360 (+)
CI01000069_03496673_03500800 NA coding upstream 111852 3496673 ~ 3500895 (+)
CI01000069_03488885_03492635 LIN7B coding upstream 120001 3488885 ~ 3492746 (+)
CI01000069_03625937_03626925 NA coding downstream 11198 3625937 ~ 3627161 (+)
CI01000069_03631837_03632897 NA coding downstream 17098 3631837 ~ 3632963 (+)
CI01000069_03636156_03639756 NA coding downstream 21241 3635980 ~ 3639985 (+)
CI01000069_03643296_03647762 SYT13, SYT5B, SYT5A coding downstream 28416 3643155 ~ 3647786 (+)
CI01000069_03766564_03767936 NA coding downstream 151825 3766564 ~ 3768198 (+)
G274564 NA non-coding upstream 156537 3452564 ~ 3456210 (+)
G274592 NA non-coding upstream 190243 3420898 ~ 3422504 (+)
G274589 NA non-coding upstream 199977 3412500 ~ 3412770 (+)
G274588 NA non-coding upstream 200275 3412228 ~ 3412472 (+)
CI01000069_03375220_03376645 LY6E non-coding upstream 235940 3375008 ~ 3376807 (+)
G274601 NA non-coding downstream 43491 3658230 ~ 3658435 (+)
G274651 NA non-coding downstream 114143 3728882 ~ 3731583 (+)
G274715 NA non-coding downstream 122526 3737265 ~ 3737533 (+)
G274716 NA non-coding downstream 146162 3760901 ~ 3761638 (+)
G274721 NA non-coding downstream 158355 3773094 ~ 3773544 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 717859 2893418 ~ 2894947 (+)
G274270 NA other upstream 931589 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1440554 2031954 ~ 2040427 (+)
G273359 NA other upstream 3133666 477727 ~ 479081 (+)
G274603 NA other downstream 185284 3800023 ~ 3803501 (+)
G274619 NA other downstream 514389 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 940570 4555269 ~ 4558480 (+)
G274953 NA other downstream 1309728 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1431488 5045967 ~ 5049408 (+)

Expression


Co-expression Network