CI01000072_00127835_00129847


Basic Information

Item Value
gene id CI01000072_00127835_00129847
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 127755 ~ 130007 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_00127835_00129847.mRNA
ATATAAATACAGGTTTTGCAGGTCTTTGCCTCAATTCTTCTTAACTTTGTTACTTTTTTCTCTTACATTCCCCCAAAATTATGCTCTCAGTGAGTTGGACAGGGACCCTGCCCTGTGGTGGATGGGACTGTGAATGTGCATTCAGGAGCCAGCAGGGTTGTTGTTGTGTTGCGAAGCCACTGTTTGAGCTGGAGGAAGCCACCTTCATACGTTTAGTTGGCTTATGGGAAGGATTGTCTCGCCTGAACAGCCAAATAGAGGAAGTTACAGCTGGATGCAAGATAGCCTTCACTGCTGCAATGCTACCAATGAGTGGATGTCTTGGGCCTTTCACCAGCAACATGTCTATCTCTTACCAGTCTGTCTCACTCAATCAAGGGAATGGGTACAATGCTGCGTTGGGTACATTCACGGCCCCCCACGCTGGTCTCTACTTCTTCTCCTTCTCGGCTTATTCCAAAGTTGGCGATGCAGGTGAGCGGCTCTACCAAAAGGTGCAGTTGATGAAGAACGGTCAGCTGATTGCCTCATCCTGGGAAGATAACCGTGAGGATTCAGAGGATAGTAGCACTCAGACTGTTCTTCTCCAGCTTAGACGTGGCTGTCAGGTCTATACTGAGTTGCTTTCAGGCAGACAGCTTTGTGGAGACACCCAGGGCCACAACACTTTCAGTGGATACCTGATATATCCATTCTCTGAGCAATGAGAAAAAACCTGTAAACACACACAAACACAACAATCTTCATTGTAATGCCTGCCATCAGAGATTTAAAAAGATGTTAATCTGGTGAATCTGGAATTCTTCATGTAAAATGTACAAAATTAACATGTACCCTACCATTGGAAGACAGTATATGGCTTAATGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_00127835_00129847.mRNA True 867 mRNA 0.45 3 127755 130007

Neighbor

gene id symbol gene type direction distance location
CI01000072_00114969_00116445 CBLN20 coding upstream 11068 114931 ~ 116687 (+)
CI01000072_00079524_00085764 NA coding upstream 41279 78303 ~ 86476 (+)
CI01000072_00055224_00076836 NA coding upstream 50400 55178 ~ 77355 (+)
CI01000072_00146339_00152728 TAGLN coding downstream 16332 146339 ~ 153386 (+)
CI01000072_00196391_00200157 NA coding downstream 66384 196391 ~ 200505 (+)
CI01000072_00245767_00246460 NA coding downstream 114437 244444 ~ 246681 (+)
CI01000072_00275132_00275592 NA coding downstream 143973 273980 ~ 277268 (+)
CI01000072_00295802_00308710 NA coding downstream 165194 295201 ~ 309557 (+)
G283760 NA non-coding upstream 30325 97223 ~ 97430 (+)
G283715 NA non-coding upstream 107158 20382 ~ 20597 (+)
G283772 NA non-coding downstream 5017 135024 ~ 135223 (+)
G283776 NA non-coding downstream 9085 139092 ~ 139578 (+)
G283777 NA non-coding downstream 12482 142489 ~ 142719 (+)
G283790 NA non-coding downstream 79258 209265 ~ 215233 (+)
G283793 NA non-coding downstream 91795 221802 ~ 222038 (+)
CI01000072_00338411_00351144 NA other downstream 219117 337071 ~ 351288 (+)
G284742 NA other downstream 1851523 1981530 ~ 1985140 (+)
G285428 NA other downstream 3840250 3970257 ~ 3976214 (+)
G286470 NA other downstream 4039097 4169104 ~ 4175651 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other downstream 4094831 4224789 ~ 4268148 (+)

Expression


Co-expression Network