CI01000072_00245767_00246460


Basic Information

Item Value
gene id CI01000072_00245767_00246460
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 244444 ~ 246681 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_00245767_00246460.mRNA
ATATAAGAATCACAGATGTTTCTAACAAAACTTTTCCATATGGTAGCGTGCGCCACTAATGAGTGTCCCACCAAAAACAAACCCTACATACTTTAGTTCCGGGAAGAAACTATGACTATTTAGCTATGACTAAATATAAATGAACTATAAAAATCAGAAATCGGTTTAGATCAAATTAAATTTATTAGTGGTAGTTAGTCTATTTTCCACGTTTGATTAGACGGATCTATTTAATTAATGGCTAAATAATCATGTGCCATTACAATTATTTGTCACAAAGCTGCAGATGGCAGATTATGATATTACAGTGTAAATTATGACAGTATTAAATCACATGTTTAATTCAAATTCAGAGTACTTCTTGTTTACTCTTATGGAGCCTGATTTATTTAGTTTACCCCTAAATGTTAATTAATGTATTAATTATCAAACATGTATTAACGTGTAGTAAAACTAAATCTATTGCAATTTTTCTTTCTAAATTAGGCTATACCAGGAAAATATACTCTCGTTCCATGAAGTTACAGGGCGAGTACAATAAAAACATATACACACAATCTGACATCACTGACTATCAAACCTTTATTTGAAAAACAAATTATTTCAAAACAGATTTACTCTTTTTCTTCTTTTTTTTTTCTTCTTTATTTCTTTTTATCAACATTACATTTCAAATGCTAACGTCCTGATAGAGAGTAGCACATTTCCCCTTTTTTGTTTCTCTTGCTTGGCTTCTTCCTCCTCTTGTTCCTCGTCTTTCTTTTCACTGATGAATCTTAAGAAGGAATCCCATGTCTTTTACTATTCTGTATTATGTATTAAAAGAAAATAAAGTACATCCAAGACAGGGCTGGACTGGGACAAAAAAATCTGCCCTGGTATATTTTGATCCAGGCGGCCCACCACCACTTCGATTTTATATATATATATATATATATATATTTTCCCAAAGAAAAGAAGCTCAATGTCAAAGTAGTTATTGAATTAATTTTAATTTATTTAGTGAAAATATAAGTATGCAACTGTGTACAACACTAGAATTTAAAATGTTGCCAGTAATCTCAGTAATAGAAGAATAAGAGAGGAAGGCAGAGAATAAGTTAATAAATAATCAATTATCAAACACAGTGATTACCACTGTAAAGCTGCTTTGAAACAATTTGTATTGTAAAAATCACTATATAAATAAAGATGACTTGACTTGATTACAGTACTGGTCTCTTTATTATTGAAACTTAAGTATTTGCAAGTTCACAAAGCAAAAATGGCATGTGCATATCACTCCAGCTCTCCTCAAACAAATGAGGACAGCCTTTAGGAGAGATGCTGGAGGGTGGAGGTCGCAGAGACAAAGGTAGCGAGCCATCTTACTTCCGGTGGGGCGTGTGGATGTTTGTGAGAAATGAGTTTAGCACGCAACAGTTTATGTGCCATGTGAGTCGCATTACAGGTGCGGGCCAACATGCAAGTGATGTTACAGTGGGCTTTGTGTCTCGTTTAAATCTCTGTTTGGATGCCTGTCGTGCTGGCTGCTTCGCTTTACTTCGCTTTACTACTTCTACTTCTTCGTGTCATCGGACCTTTGTCACTACGATCATTATACTGTTCCTGTGAATCAAGGGAGACTGGATCACAGCCTGCTGCTGGATTGGACTGATCTCTCCGCGTTGTAAACTAGTTTTAGCTCGTGTCGTGTGTCGTCACACGGTGTCTTTTTGCTAACCGTTTATATTTGCAGCGTCTAATACCCGCTGAATCAGCTGGACTGTGGTTTGGGCTTGTGGCGTGCAGGTGCCTTTACCATCAATTGGAATTGTGTGAGTAACAAACTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_00245767_00246460.mRNA True 1835 mRNA 0.36 4 244444 246681

Neighbor

gene id symbol gene type direction distance location
CI01000072_00196391_00200157 NA coding upstream 43939 196391 ~ 200505 (+)
CI01000072_00146339_00152728 TAGLN coding upstream 91058 146339 ~ 153386 (+)
CI01000072_00127835_00129847 NA coding upstream 114437 127755 ~ 130007 (+)
CI01000072_00114969_00116445 CBLN20 coding upstream 127757 114931 ~ 116687 (+)
CI01000072_00079524_00085764 NA coding upstream 157968 78303 ~ 86476 (+)
CI01000072_00275132_00275592 NA coding downstream 27299 273980 ~ 277268 (+)
CI01000072_00295802_00308710 NA coding downstream 48520 295201 ~ 309557 (+)
CI01000072_00315525_00322937 SARM1 coding downstream 66376 313057 ~ 323069 (+)
CI01000072_00338411_00351144 NA coding downstream 90390 337071 ~ 351288 (+)
CI01000072_00368515_00382013 FOXN1 coding downstream 121834 368515 ~ 382719 (+)
G283797 NA non-coding upstream 535 240653 ~ 243909 (+)
G283793 NA non-coding upstream 22406 221802 ~ 222038 (+)
G283790 NA non-coding upstream 29211 209265 ~ 215233 (+)
G283777 NA non-coding upstream 101725 142489 ~ 142719 (+)
G283776 NA non-coding upstream 104866 139092 ~ 139578 (+)
G283903 NA non-coding downstream 15931 262612 ~ 262831 (+)
G283925 NA non-coding downstream 51602 298283 ~ 300326 (+)
G283951 NA non-coding downstream 133235 379916 ~ 380158 (+)
G283927 NA non-coding downstream 393748 640429 ~ 642060 (+)
G284742 NA other downstream 1734849 1981530 ~ 1985140 (+)
G285428 NA other downstream 3723576 3970257 ~ 3976214 (+)
G286470 NA other downstream 3922423 4169104 ~ 4175651 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other downstream 3978157 4224789 ~ 4268148 (+)

Expression


Co-expression Network