G283925


Basic Information

Item Value
gene id G283925
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 298283 ~ 300326 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU321804
TGTATTTTAATCGAAAGCTTGGCAAACAGCTTTAGAGAATTTGATGTTTCCCCATTCAAAGAGATAGGAGCTGCACTTGGATGCCCGAGAGGCGTTTCAAAGATGGCCGCCGAGTGAAATGACTTCTCTTAAAGGGACTTTGACATTTCTCCGTGTTTCTCGTCAGTTTTATCAAAGCTTTTTAATTTTTAATTAATAAATTTAAGATCATCATGTTTGCAGCGAACAATATATTTCTGACCTAGTGGAATAATAGTAATAATATCTAGGTCTGAATTGAAATAGGCTATATTGTACGTTTTAATGGATCACGCTACAAACATAATGATCTTATAATACATGATGCATTGCTCTCTCCGTTATCGCATAAATTCCCACTTTTGTACACTTTTGCTTTAACGGACTTTAGACTGCAAAATCAAGCTGTTATATTCATATATTTATTGTCCAACATTCCCATTTTTTCTGATGCATGTCCTTAATTTAATTTCATATGTTGGTAATAATTCAGTGTTTATAAGCCTTTTAAAATATTTTAACCCAAACTGACTGGGTTTCTAGAGAGCAAAGATTTTGTGAAAAAAGTGGAAGACTTAAACACAAAGTGTGTAAAATAAACTGTAAAAAGGATTTGATGATCAGTATTTTATTCTGTGTTGTCATCATTCAGGTTGGATTTCAGCTTTAATGTATTTTTTTTTTTTTTTTTAAACAAAGCAGCTGATATTGCCATAGTTCTAGTGGACTGCCGACTCGCTTTCACCCCAAAATTGCGGAAGCGCAGGGCCGCTGCTGGGCGCCGGTGTTTCAATGGAACGTTCTATTGAGTGTCGCTTCTTGTTAGTGTATATTCTTTGGTTTTATCCACCTTATTCCTACGCCCCATGACGCTTTGCGCCAATTATGGGTGTAACTTCCGTTAATGAAAAAAGCTCTTGCCATAGATATTCTTGTTATAACATGTTATATTAAAATACCAAGCGTTACCTTATTCTCATGTTGTCTGAAAATAAAACATTAAAGAAAAATTGACAGCTCATTCAGTCAAACTGACGGATAAGCTTTATTTGTAGGGCAACCTTATGATTTGTAATGATTCGTTTGTCTTTTTAAATGAAGTTCCCCAAACCGGAAGTGCAACCCATAATTCGAAACGCAGTAGACTCGTCAGGAATAAGGTGGATAGCAATAAATAGCAATAATAGATTGGTTAAGTAACATTACCCACAGTCCACTTTAAGTACTTTTGTTAATATTTATACTTCAGTGATTATATGGTATCTTTCCTTGATCGTCTGAAATGTATGTTAGCAAAATGTTACGCTAGCATAGCATATGTTTTTAATGATACTGAGTCCAAAACGTCTTGAATGCTTTTATTTTATGTTTCGCTGTAGGCTATATGTTTTTATTTTTTTTTAGTTTGGGTGTATTTTATTATTTTTATTTGGATTTTTTGTTCATGTTTTGTGTGTTTTTCAAAATAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321804 True 1491 lncRNA 0.34 2 298283 300326

Neighbor

gene id symbol gene type direction distance location
CI01000072_00275132_00275592 NA coding upstream 21015 273980 ~ 277268 (+)
CI01000072_00245767_00246460 NA coding upstream 51602 244444 ~ 246681 (+)
CI01000072_00196391_00200157 NA coding upstream 97778 196391 ~ 200505 (+)
CI01000072_00146339_00152728 TAGLN coding upstream 144897 146339 ~ 153386 (+)
CI01000072_00127835_00129847 NA coding upstream 168276 127755 ~ 130007 (+)
CI01000072_00315525_00322937 SARM1 coding downstream 12731 313057 ~ 323069 (+)
CI01000072_00338411_00351144 NA coding downstream 36745 337071 ~ 351288 (+)
CI01000072_00368515_00382013 FOXN1 coding downstream 68189 368515 ~ 382719 (+)
CI01000072_00400359_00403220 CRYBA1A, CRB12, CRYBA1, CRYBA4 coding downstream 99490 399816 ~ 403514 (+)
CI01000072_00404877_00406183 DHRS13A.3, DHR13 coding downstream 104551 404877 ~ 407092 (+)
G283903 NA non-coding upstream 35452 262612 ~ 262831 (+)
G283797 NA non-coding upstream 54374 240653 ~ 243909 (+)
G283793 NA non-coding upstream 76245 221802 ~ 222038 (+)
G283790 NA non-coding upstream 83050 209265 ~ 215233 (+)
G283951 NA non-coding downstream 79590 379916 ~ 380158 (+)
G283927 NA non-coding downstream 340103 640429 ~ 642060 (+)
G284111 NA non-coding downstream 345345 645671 ~ 646059 (+)
G284117 NA non-coding downstream 362267 662593 ~ 662875 (+)
G284121 NA non-coding downstream 367447 667773 ~ 668011 (+)
G284742 NA other downstream 1681204 1981530 ~ 1985140 (+)
G285428 NA other downstream 3669931 3970257 ~ 3976214 (+)
G286470 NA other downstream 3868778 4169104 ~ 4175651 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other downstream 3924512 4224789 ~ 4268148 (+)

Expression


Co-expression Network