G287657


Basic Information

Item Value
gene id G287657
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000073
NCBI id null
chromosome length 1307889
location 759073 ~ 764762 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU326120
GCCAGTTTGGACACCGTCGTGAGCCGTATGTTTGACACCCCTGCTCTAGTGTTAGAAATGTTAGAAACAAACCACTCTTTCTCTCTAGTGCTTTAGTTTGTCATCAGGAGCAGAAACCATTCATGAGAAGCAGAACTATAGCAGACTGAACATGATGCTTTATACAAACATCATTATAGATGAAACACTTGAAAACAAGACATTTCAGTTATTTATACACATTTAATAATTGACTGTATTACCTGTGTTACTGATGAGGAGAAAGATGAAGGATGTGAGCAGATGATCTACTGCCATTGTAACAAACGTCAAGATGGCTGAAGTTGTCTTCTTAAAACAGGAAGTTGAATATGTTGAAATGACGCTCATGTATCCTCCTTATAACTCTCTCACCACAAACAGCTCAGTTCAGGTTTTGTCATGATCCACGGCTGGACAATTATTAGTTTAGTTAGATTTAATGTAATGCTTCCAAAACTATAAAAATAATAATAATAATAATAATAATAATAAAGCAGGAGATGTTTAACAAAGTTATAGGACAATTTAAGAAAGTTACAGCCTTTTAATAACCCGCAGAGAAGAGACTCGAATCTATGAAAACTGAAAACAGACATTAGTTTGAAGCAGTGACAGAAAACATTCCAGTGTCCAACAATAAACTGAACAAATCTAAATGAGTAACTGTAGATATGTTTAAACCCATTCATGATACAAGCCACACACAGGTTTAGATGATATATTTGAATTGACATTTTTTAAGCCCAACTAGAACAGAGGCCCAGTTTATCTGGTTCGCATGAACCTGTCAGCCTCTGGTGGTAGAAGTTATAACTACACCATCTGACTGCAAAAAACATCTTTTTCCAGTGACAGCCATTCAAAAATATCAGTGTAAGAAATGGCAGATCTCAAACCATGTACTTCAGGGATCCTGGAGCACCGGAGCAACTGTCTTTGAGAAGAACAAGAATGCTCCGTTTGTAAGTTCAGTCAGGATAGCTTTCTCCAGGAATTGTTTGGTCAGTTTCAGCTGAAAATTTGATTTATTCTGAAGTATTATCAAATTTACCTGTACTTAACCAAGTCAGTCCCACTGATATTTTAAAATCTCTTGTTCAACAGAAACCAAATTCAAACAGCACAAAACACAAATAAACAGTATGATTACAATACAAGAAATTATATTCAGGTGACATGAGAGAATCAGAGAAACACCCGTTCAAAACATCTGCAGTAACTGACTGAAATAGGGATTATGCGCAATCTAACTTCCGTTTTCTCTAAAACAGATTAGATCACTTTCAGTTTAGGTCTTTTGTATGTGCTTCATGAAAAATTAGCTGTTTTATTCAAGCTAACTTAAGGTGCGAGCAAAGATGGGCATAACTGATGTCCCCCGCATATGCAGATTGATATTTAAAAGCTTTTTTCCTTTTTCTTCATCTATCTAACGTTTAGATATTTAATAGAATAAAACACCCATAACAATGTGAACTAGGTAGATTCGCTGATTACCTTAAAAGTCCATAGATATGCCATCAGTTCATACGGCTGTTTCCTTTCTCTGACAAGCAGATGCAATGAGACCAGTTTTCCAGTTTGGTCATGTGACGTTCGACATATACCCTATTCATTCACAACAGTAAGAGTATCTGTACACTTCCACAAGAGTGATGAAGTCAGAGAGTTAAATGAAGACTTTAAGCTCTGTTTGTGAGTCCAGTCAATCATCAAAGTCTTTTTATCCAGTTGAGTCTGATCTTCAGCAGTCATGAGCAGATGAAGGTGTTTGGTGTCCTACTGTACAGTAGCTGATGGTGGTCCAGGTATCTCCTGTCATCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326120 True 1847 lncRNA 0.37 2 759073 764762

Neighbor

gene id symbol gene type direction distance location
CI01000073_00688992_00691075 BLVRA coding upstream 67819 688992 ~ 691254 (+)
CI01000073_00638193_00673213 HECW1B, HECW1 coding upstream 85372 638193 ~ 673701 (+)
CI01000073_00627723_00630714 NA coding upstream 127881 627723 ~ 631192 (+)
CI01000073_00591004_00626411 NA coding upstream 131892 591004 ~ 627181 (+)
CI01000073_00543374_00545899 EXOC3 coding upstream 213174 543374 ~ 545899 (+)
CI01000073_00790983_00791279 NA coding downstream 25764 790526 ~ 791521 (+)
CI01000073_00792429_00801911 CACTIN, CACTIN.L coding downstream 27667 792429 ~ 802248 (+)
CI01000073_00805997_00811146 NA coding downstream 41235 805997 ~ 811165 (+)
CI01000073_00925356_00926204 NA coding downstream 158951 923713 ~ 926721 (+)
CI01000073_01036546_01038321 NA coding downstream 271693 1036455 ~ 1038388 (+)
G287664 NA non-coding upstream 16635 741461 ~ 742438 (+)
G287720 NA non-coding upstream 18804 739811 ~ 740269 (+)
G287719 NA non-coding upstream 19317 738684 ~ 739756 (+)
G287666 NA non-coding upstream 21975 736272 ~ 737098 (+)
G287654 NA non-coding upstream 22876 734209 ~ 736197 (+)
G287649 NA non-coding downstream 9874 774636 ~ 775805 (+)
G287757 NA non-coding downstream 46792 811554 ~ 811757 (+)
G287743 NA non-coding downstream 47867 812629 ~ 815102 (+)
G287740 NA non-coding downstream 72638 837400 ~ 842643 (+)
G287638 NA other upstream 40672 709044 ~ 718401 (+)
G287391 NA other upstream 559301 190944 ~ 199772 (+)
CI01000073_00048073_00049706 NA other upstream 668350 47933 ~ 50512 (+)

Expression


Co-expression Network