G287757


Basic Information

Item Value
gene id G287757
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000073
NCBI id null
chromosome length 1307889
location 811554 ~ 811757 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU326226
CATATGTCGCGTCAGCGGATTACTCATTTTGCGCTAGTCGACTTGCGCATTCTGCGTGCGGTCTTTCGCCAGAAGCTAGTTGTTTGAATATATGAAGTTTTAAATATGGATATTTTTCTCACAAAAACGCATCCTTTTACTTCAAAAGGCCTTTATTAACCCTCGGGAGTCGTATGGATTATGACATTTTTTCTGTCTTCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326226 True 204 lncRNA 0.40 1 811554 811757

Neighbor

gene id symbol gene type direction distance location
CI01000073_00805997_00811146 NA coding upstream 389 805997 ~ 811165 (+)
CI01000073_00792429_00801911 CACTIN, CACTIN.L coding upstream 9306 792429 ~ 802248 (+)
CI01000073_00790983_00791279 NA coding upstream 20033 790526 ~ 791521 (+)
CI01000073_00688992_00691075 BLVRA coding upstream 120300 688992 ~ 691254 (+)
CI01000073_00638193_00673213 HECW1B, HECW1 coding upstream 137853 638193 ~ 673701 (+)
CI01000073_00925356_00926204 NA coding downstream 111956 923713 ~ 926721 (+)
CI01000073_01036546_01038321 NA coding downstream 224698 1036455 ~ 1038388 (+)
CI01000073_01099082_01112685 CDC34A, UB2R1, CDC34, UBE2R2, CDC34B coding downstream 287083 1098840 ~ 1113138 (+)
CI01000073_01130335_01140889 KCNJ9 coding downstream 318124 1129881 ~ 1142142 (+)
CI01000073_01161805_01169094 NA coding downstream 350048 1161805 ~ 1170873 (+)
G287649 NA non-coding upstream 35749 774636 ~ 775805 (+)
G287656 NA non-coding upstream 46323 761938 ~ 765231 (+)
G287657 NA non-coding upstream 46792 759073 ~ 764762 (+)
G287664 NA non-coding upstream 69116 741461 ~ 742438 (+)
G287743 NA non-coding downstream 872 812629 ~ 815102 (+)
G287740 NA non-coding downstream 25643 837400 ~ 842643 (+)
G287735 NA non-coding downstream 71003 882760 ~ 885894 (+)
G287859 NA non-coding downstream 263720 1075477 ~ 1075758 (+)
G287860 NA non-coding downstream 264340 1076097 ~ 1076335 (+)
G287638 NA other upstream 93153 709044 ~ 718401 (+)
G287391 NA other upstream 611782 190944 ~ 199772 (+)
CI01000073_00048073_00049706 NA other upstream 720831 47933 ~ 50512 (+)

Expression


Co-expression Network