G287860


Basic Information

Item Value
gene id G287860
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000073
NCBI id null
chromosome length 1307889
location 1076097 ~ 1076335 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU326330
GTAACACAGAAATAATAATACTGTGTGGTTGAAAAGACTGTCTCTCTGGATCAGCGGCAGCGCCAACGCAGATCTGAATGTTCCACTGTGATCGTACTTGTCAAAGGTTTAATAGACACAGCCGAATCATTGTCATTAAGAAATAAGTTCAAACCAAGAGTGCCACAAGAGTCCTGAAAAGTGAAGCCAAAGTTTCTTGATCGCCCCCAGGTGGCTGGATGCAGTATAGTTCATAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326330 True 239 lncRNA 0.43 1 1076097 1076335

Neighbor

gene id symbol gene type direction distance location
CI01000073_01036546_01038321 NA coding upstream 37709 1036455 ~ 1038388 (+)
CI01000073_00925356_00926204 NA coding upstream 149376 923713 ~ 926721 (+)
CI01000073_00805997_00811146 NA coding upstream 264932 805997 ~ 811165 (+)
CI01000073_00792429_00801911 CACTIN, CACTIN.L coding upstream 273849 792429 ~ 802248 (+)
CI01000073_00790983_00791279 NA coding upstream 284576 790526 ~ 791521 (+)
CI01000073_01099082_01112685 CDC34A, UB2R1, CDC34, UBE2R2, CDC34B coding downstream 22505 1098840 ~ 1113138 (+)
CI01000073_01130335_01140889 KCNJ9 coding downstream 53546 1129881 ~ 1142142 (+)
CI01000073_01161805_01169094 NA coding downstream 85470 1161805 ~ 1170873 (+)
CI01000073_01200849_01245031 NA coding downstream 124514 1200849 ~ 1245138 (+)
CI01000073_01250321_01255305 NA coding downstream 173986 1250321 ~ 1255319 (+)
G287859 NA non-coding upstream 339 1075477 ~ 1075758 (+)
G287735 NA non-coding upstream 190203 882760 ~ 885894 (+)
G287740 NA non-coding upstream 233454 837400 ~ 842643 (+)
G287743 NA non-coding upstream 260995 812629 ~ 815102 (+)
G287757 NA non-coding upstream 264340 811554 ~ 811757 (+)
G287864 NA non-coding downstream 5363 1081698 ~ 1083125 (+)
G287880 NA non-coding downstream 94984 1171319 ~ 1173975 (+)
G287899 NA non-coding downstream 196491 1272826 ~ 1273425 (+)
G287638 NA other upstream 357696 709044 ~ 718401 (+)
G287391 NA other upstream 876325 190944 ~ 199772 (+)
CI01000073_00048073_00049706 NA other upstream 985374 47933 ~ 50512 (+)

Expression


Co-expression Network