Gene
RNA
| Item | Value |
|---|---|
| gene id | G287864 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000073 |
| NCBI id | null |
| chromosome length | 1307889 |
| location | 1081698 ~ 1083125 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU326349 | False | 1290 | lncRNA | 0.34 | 1 | 1081698 | 1082987 |
| TU326345 | False | 1036 | lncRNA | 0.34 | 1 | 1081855 | 1082890 |
| TU326348 | False | 1271 | lncRNA | 0.34 | 1 | 1081855 | 1083125 |
| TU326344 | False | 970 | lncRNA | 0.35 | 1 | 1081921 | 1082890 |
| TU326347 | True | 1205 | lncRNA | 0.34 | 1 | 1081921 | 1083125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000073_01036546_01038321 | NA | coding | upstream | 43310 | 1036455 ~ 1038388 (+) |
| CI01000073_00925356_00926204 | NA | coding | upstream | 154977 | 923713 ~ 926721 (+) |
| CI01000073_00805997_00811146 | NA | coding | upstream | 270533 | 805997 ~ 811165 (+) |
| CI01000073_00792429_00801911 | CACTIN, CACTIN.L | coding | upstream | 279450 | 792429 ~ 802248 (+) |
| CI01000073_00790983_00791279 | NA | coding | upstream | 290177 | 790526 ~ 791521 (+) |
| CI01000073_01099082_01112685 | CDC34A, UB2R1, CDC34, UBE2R2, CDC34B | coding | downstream | 15715 | 1098840 ~ 1113138 (+) |
| CI01000073_01130335_01140889 | KCNJ9 | coding | downstream | 46756 | 1129881 ~ 1142142 (+) |
| CI01000073_01161805_01169094 | NA | coding | downstream | 78680 | 1161805 ~ 1170873 (+) |
| CI01000073_01200849_01245031 | NA | coding | downstream | 117724 | 1200849 ~ 1245138 (+) |
| CI01000073_01250321_01255305 | NA | coding | downstream | 167196 | 1250321 ~ 1255319 (+) |
| G287860 | NA | non-coding | upstream | 5363 | 1076097 ~ 1076335 (+) |
| G287859 | NA | non-coding | upstream | 5940 | 1075477 ~ 1075758 (+) |
| G287735 | NA | non-coding | upstream | 195804 | 882760 ~ 885894 (+) |
| G287740 | NA | non-coding | upstream | 239055 | 837400 ~ 842643 (+) |
| G287743 | NA | non-coding | upstream | 266596 | 812629 ~ 815102 (+) |
| G287880 | NA | non-coding | downstream | 88194 | 1171319 ~ 1173975 (+) |
| G287899 | NA | non-coding | downstream | 189701 | 1272826 ~ 1273425 (+) |
| G287638 | NA | other | upstream | 363297 | 709044 ~ 718401 (+) |
| G287391 | NA | other | upstream | 881926 | 190944 ~ 199772 (+) |
| CI01000073_00048073_00049706 | NA | other | upstream | 990975 | 47933 ~ 50512 (+) |
