CI01000075_00275752_00278496


Basic Information

Item Value
gene id CI01000075_00275752_00278496
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 275238 ~ 278542 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00275752_00278496.mRNA
AGTCCATCTCCAGCTACCAAAGAACATCTCTGAGGATTTTCTCATCATGTTGCCCGCAGTGATCTGGATCTCCCTGATGGGACTCGCCATCAGTAGACCGTCTCTGAATTACCTGGAAAACCACTTTACGGTGCAAAACGAGTCGGAAGAAGTGCGATCCGAGGCGATCAAGAGGCTTTTGGAGGTGTTTGGGATGGAGGATCCTCCTGCTGCACTGGTTCGGGGACACAAACAGCCTCCTCAGTACATGCTGGACCTGTACAACACCATCGCGGATGTGGACGGAGTCACCAAAGACCCGACGCTCCTGGAGGGAAACACCGTCCGCAGTTTCTTCGATAAACTGCATAGTGAGCATGTTGAGTTTCTCTTCAACATGTCCACGGTGGCCAAGAGTGAAAAGATCCTGACGGCTGAACTGCATCTGTTCAAGCTCAGGCCACAAGCATCACTCATCTTCAACAGACATCACTTCTGTCAGGTCAGTGTATATCAGGTTCTCGATAGCAGCAAAAAGAACGTCTCACAAGGGAAGAAGCTGCTCTCGTCCCGGCTGGTGCCCATCCATTCCTCCGGCTGGGAGGTTTTTACCATCACTCAAGCTGTGCGCTCTTGGATGTCCGATGAGGGCAGTAATCTTGGTCTCCTGGTCACGGTGAGGACTCTATCAGGTCTTCAGATGGACCTGAAAAACTGTCCATGCGTCTTCCCATGGGATCATATAGAAAAAGTGCCAACAAAAGCAACAGGTGACAGGTAGAGTATGAGCTGATCTCCTCCTATAGAGGGAGAAAGTAAAAGAGAGAGAGAACAAGGGGTAACAGGTAAAACAGCTGCAGGGCTTCCACAGGATCAACTGATACCGTTCAGCCTCTGTGCCAACCAATTAAACTCACAATGGTGAACTAGTGCACGAATGCTTGCATATTTAATGCCATAATTGAGATGCATTTGCTGATATTAACACAATACACCAGATTGCTTCTCATGAGATCTCTAGTCAAAACACTTTATCAGGAAAATTACTCAAACCAGGATGAAAGAGGTGAATCTCATGTCTGGGTCACATTTCACTCCACAAAAAAAAAAACAGAAAAAAAAAGTCAACATTGAAAATAATGAGGAAAAAAGTCAAATACAAAATGTTCAGACATTACAATGATGAGTATTTGAACAGAAAACATGCTTGTTCTATAATTTGTTTTTTGTTGTTATATATTTCTTATTATTTATTCATTTATTTAATTAACCAAATATAATGTCTTTTTAATAAA
>TU327862
TCCATCTCCAGCTACCAAAGAACATCTCTGAGGATTTTCTCATCATGTTGCCCGCAGTGATCTGGATCTCCCTGATGGGACTCGCCATCAGTAGACCGTCTCTGAATTACCTGGAAAACCACTTTACGGTGCAAAACGAGTCGGAAGAAGTGCGATCCGAGGCGATCAAGAGGCTTTTGGAGGTGTTTGGGATGGAGGATCCTCCTGCTGCACTGGTTCGGGGACACAAACAGCCTCCTCAGTACATGCTGGACCTGTACAACACCATCGCGGATGTGGACGGAGTCACCAAAGACCCGACGCTCCTGGAGGGAAACACCGTCCGCAGTTTCTTCGATAAACTGCATAGTGAGCATGTTGAGTTTCTCTTCAACATGTCCACGGTGGCCAAGAGTGAAAAGATCCTGACGGCTGAACTGCATCTGTTCAAGCTCAGGCCACAAGCATCACTCATCTTCAACAGACATCACTTCTGTCAGGTCAGTGTATATCAGGTTCTCGATAGCAGCAAAAAGAACGTCTCACAAGGGAAGAAGCTGCTCTCGTCCCGGCTGGTGCCCATCCATTCCTCCGGCTGGGAGGTTTTTACCATCACTCAAGCTGTGCGCTCTTGGATGTCCGATGAGGGCAGTAATCTTGGTCTCCTGGTCACGGTGAGGACTCTATCAGGTCTTCAGATGGACCTGAAAAGTGTGCGTTTTGCATCAGGCCGTCACCACCATCACAGCAAACAGCCCATGCTGGTCCTCTTCACAGACGACGGCAGACGGGCGGCTTCTCTGGAGATCACTGCT

Function

NR:

description
anti-dorsalizing morphogenetic protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00275752_00278496.mRNA False 1274 mRNA 0.44 5 275238 278542
TU327862 True 794 TUCP 0.53 4 276353 278540

Neighbor

gene id symbol gene type direction distance location
CI01000075_00267234_00274802 CIB2, CIB3 coding downstream 436 267116 ~ 274802 (-)
CI01000075_00164716_00172975 ATCAYB, ATCAY coding downstream 102263 164361 ~ 172975 (-)
CI01000075_00152252_00155011 NMRK2 coding downstream 120108 151922 ~ 155130 (-)
CI01000075_00142446_00146058 LOXL5B coding downstream 129180 141767 ~ 146058 (-)
CI01000075_00080935_00083813 NA coding downstream 189090 80086 ~ 86148 (-)
CI01000075_00281734_00287747 NA coding upstream 3003 281545 ~ 287772 (-)
CI01000075_00305485_00307473 NA coding upstream 26752 305294 ~ 308340 (-)
CI01000075_00307523_00328194 NA coding upstream 28981 307523 ~ 331562 (-)
CI01000075_00336241_00341860 SPINC, SPINB coding upstream 57699 336241 ~ 341860 (-)
CI01000075_00385897_00442260 HCN2 coding upstream 105612 384154 ~ 442260 (-)
G289076 NA non-coding downstream 2108 271394 ~ 273130 (-)
G289060 NA non-coding downstream 18910 252885 ~ 256328 (-)
G289072 NA non-coding downstream 45067 229770 ~ 230171 (-)
G289035 NA non-coding downstream 145937 125820 ~ 129301 (-)
G289027 NA non-coding downstream 176684 98347 ~ 98554 (-)
G289099 NA non-coding upstream 121303 399845 ~ 401941 (-)
G289102 NA non-coding upstream 240923 519465 ~ 614366 (-)
G289090 NA non-coding upstream 269811 548353 ~ 566986 (-)
G289036 NA other downstream 160633 108703 ~ 114605 (-)
CI01000075_00022145_00044289 NA other downstream 219474 20947 ~ 44289 (-)
G289167 NA other upstream 491552 770094 ~ 788399 (-)
G289427 NA other upstream 1213781 1492323 ~ 1515938 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016937 admp coding NC_007113.7 CM002886.2 53483322 ~ 53500424 (-)