CI01000075_01358548_01364127 (ARMC6)


Basic Information

Item Value
gene id CI01000075_01358548_01364127
gene name ARMC6
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 1358548 ~ 1364488 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_01358548_01364127.mRNA
ATGGTCCTGGAATTGACATTCAGGGTCAGAAACGAGGCTTTAGAGTGTCTCAGAAATGCAGTGGCGTCATCGTCCGCATCTGTCCTGGAGGATCTGAGAGTCTTCACCCAGCAGTGCTCTCTCGGCTTCGCACAACGATACCTGGCAGCTCAAAAGGAGGCGTATCCCACGATCCTTGCTTGCTGCCGGAGAGCCGGTGAAGAGAAGGAAGCCCTTTCTGTCGCTCTCTCCGCCCTCTCGGCACTAACAGACGGCCAGCCGGATCTCCTGGATGTGGAAGGGCAAGAGTTTTTGATCGGTGCTTTAACTGCGCACCAGACGGATCCCGCTCTCACCTGCTTGTGTATCCGTATCGTACGGCACTTCTGTCTGAAACACGAGAACAACAGGCAGGGTTTGGTGAAGGCGGGCGTGCTGCCGCTGCTCACCGGGAGCATCACACGCCACATTGAACATCCCGAGGTCGTGAGGGAGGCCTGTATCGCGCTGAGGGTCATGACCTTTGACGACGACGTGCGTGTTCCCTTTGGACAGGCTCATGAACATGCCAGGATGATCGTGTTAGAGCAGAACGGACTGAAAGTCATTGTTGAAGCTGCTAAAGCTCACTCAGGAAACACCTCAGTGCTCAGTGAACTCTGTGCCACTCTGTCCCGTCTGGCCGTGAGAAACGAGTTCTGTCAGGACATCGTAGACCTCGGAGGCCTGAACTTCATGATCACACTCCTGGCTGACAATCTAGATTGTCAG

Function

symbol description
armc6 Orthologous to human ARMC6 (armadillo repeat containing 6).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_01358548_01364127.mRNA False 750 mRNA 0.55 3 1358548 1364127

Neighbor

gene id symbol gene type direction distance location
CI01000075_01343318_01346352 SLC25A42 coding downstream 12196 1343291 ~ 1346425 (-)
CI01000075_01335455_01336921 SLC25A42.S, SLC25A42 coding downstream 21064 1334742 ~ 1337484 (-)
CI01000075_01206857_01230864 NA coding downstream 127684 1206857 ~ 1230864 (-)
CI01000075_01166008_01203828 NA coding downstream 154720 1164952 ~ 1203828 (-)
CI01000075_01161238_01161465 NA coding downstream 197083 1161192 ~ 1161465 (-)
CI01000075_01372627_01381776 BTBD2 coding upstream 7726 1371853 ~ 1384122 (-)
CI01000075_01478557_01486032 NA coding upstream 114430 1478557 ~ 1486032 (-)
CI01000075_01518506_01519153 GPX4B, GPX4, GPX4A coding upstream 154003 1518130 ~ 1519153 (-)
CI01000075_01523380_01525836 GPX4 coding upstream 159092 1523219 ~ 1526110 (-)
CI01000075_01532241_01561644 NA coding upstream 167214 1531341 ~ 1561644 (-)
G289510 NA non-coding downstream 34367 1323930 ~ 1324181 (-)
G289509 NA non-coding downstream 35498 1322146 ~ 1323050 (-)
G289493 NA non-coding downstream 43255 1295298 ~ 1315293 (-)
G289490 NA non-coding downstream 83091 1275240 ~ 1275457 (-)
G289536 NA non-coding upstream 80979 1445106 ~ 1445310 (-)
G289538 NA non-coding upstream 82795 1446922 ~ 1447258 (-)
G289450 NA non-coding upstream 88353 1452480 ~ 1453118 (-)
G289434 NA non-coding upstream 101309 1465436 ~ 1466484 (-)
G289167 NA other downstream 570149 770094 ~ 788399 (-)
CI01000075_00307523_00328194 NA other downstream 1030231 307523 ~ 331562 (-)
CI01000075_00275752_00278496 NA other downstream 1080008 275238 ~ 278542 (-)
G289036 NA other downstream 1243943 108703 ~ 114605 (-)
CI01000075_00022145_00044289 NA other downstream 1302784 20947 ~ 44289 (-)
G289427 NA other upstream 128196 1492323 ~ 1515938 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016975 ARMC6 coding NC_007113.7 CM002886.2 57121596 ~ 57143477 (-)