G289002


Basic Information

Item Value
gene id G289002
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 93529 ~ 97041 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU327763
GTGAATTGAACAAGTTTAATGACATTAATGTACACATCATCACACTAGGAACGTATGAAGGCAGTACAGGACATGTGACAGGTGGAAAGTTTTCATTTACAGCACGACACACGTAAATCCAAAAGAGCATAAAATAAGACATCGTGTGAATAGTTGTATATAAAATAGATACAGTCGTTGATTAATAAGAGCTTGTCATCAGATAAGGCCTTAAACATGAAGCGTATACATGCATGACATCTTTGTTGTGTTTGGTTGCACTCATTTTGAGCTTGTCTCGAGCATGCAAAAATACAGCTGCTTAGATCTTCTCTCATGAGATCAAATTATGTAGCAGAATTGCTGTCGTGAGTCCATTTGCTACAAAATATTGTAAACATATTATACATCAGCACCTGTAGTGTCCACTTCAACAGTCCGACAAGAATGAATGGTCACTGGAAGGGTGAGATTAGTTTGTGACCTTTATGCATCAGTGAATGGGTAGTTGACTTGACATGTGACAGCCGCTCAGAATAATGTTTCAACACACAATTAGCTGACTGACATCATCACATCCACATGGATATGAAATCATTATCATTTTAATACACTTCATCATTAAGCACTGTGGGGTTTGATGCACTCGAAGGTGAATATGATATGCAATGTGATATTGCTTTTATACAACACTTCATATTGAGCAACTGACATTTCAGACACTATATAGCCAGTAATTTGTTTGTTGATGCTCTGCCAAAGAAAATAGTTCCACAAGAAGTCATCTGGATCAGGTGAGAACTGTCAACAAACTAATGATACAGTGCGAGTGAAGTGAATTCAGTGCTCTATAAATACTAGTCTCGACTGCTAGCGTAAATCCAATTAGTGTACCAGAACTAACTGTTGTATAGGCCTAAAAATATTTATAGTTAAATATATATACAAAACATTATTGGTCAGTGCAGCGTTCCAGTAGTGCTAAAATACAAGATAAAGAAACAGCTATGACACAAAACTATGGAAGCTTGTTTCTGCCACTGAATAAAAAATAAAAACTTTTTTCTCGCAATTCGGACTTTTTTTTTTCGCCTCAGAAGTGTGAGATATAAACTCGCAATTGCGAAGAAAATTCAGAATTGCGAGAAAAAAGTCAGAACTGCAAGATATAAAATTGCAATTGAGAAAAAGTCATAACCGCAAGAAAAAAATTCAGAATTGCGAGATATAAAATAGCAATTGCGAAGAAAATTCAGAATTGTGAGAAAAGTCTGAATTACGAGATATAAACTCGCAAATGCGAAAAAAGTAAGAATTGCAAGATATAAACTTGCAACTGCAAAAAAAAGAGTCAGAATTGCAAGATATAAACTCGCAATTGCGAAGAAAATTCAGAATTGCAAGAAAAAAGACAGAACTGCAAGATATAAAATTGCAATTGCGAAAAAGTCATAACCGCAAGAAAAAAATTCAGAACTGCAAGGAAAAAAATTCAGAATTGCGAGATATAAAATAGCAATTGCGAAGAAAATTCAGAATTGCGAGAAAAAAGTCTGAATTACGATATATAAATTCGCAAATGCGAAAAGTAAGAGTTGCAAGATATAAACTTGCAACTGCAAAAAAAAAAAAAAAAAAAGTCAGAATTGTGAAATAAAAAGTCGCAATTATCTTTTAATTTTTTTTATTCCATGGCAGAAACAAGCTTCCATACAAAACACCATCAGAAACTTTAGTTTTGTTGCATAGCAACATGCAGTCAAGTCTGGGACTGTAGCTATTTTATCGGAATGAAGGCAATTATTATAGCCTAATAATGATTTAATAATATATCAAAGCACCAAAATTAGTTCCAAAAGAAACCAAAACACGATCGTGTTGCCAAGCAACGCACTGATACAAATAGAGAACTTTCCAGTGATATTTTAGTTAAACCTTAGGAACGCTGCTTGCCCAATCAAAAATATTGTATATGAAATAAAAAAGATATAGTTCCGGTCCTGGAGGATTGATCAATCACTAAAAATATGACGCGAACAATCGCTATAGTTCTGTCGTGTCAGGGACTATATCTTTTGGCGGAATATATGTCCATCATTATAATAAACGCAACGAAAATAGTTCCAAAAGAAACCAAAATATGATCGAGCGTCTCGTGCTACCAAGCAACACACATAGATATACTTGGAGCGAGCTTTTCAATGACATTTTAGGAAAATCGTCGCTAGCGGGGCAAAACGTGGTGACGATTCTAGTTCGCCGTATCACTGCGCACAATCGCTAGCTTTATAGCATAACAACGCTTTGTGAATTAGCTTAATTAAATAACGTTTTAATTAAAAATGCGTTTCTTTACTACTTTATTACCAAACTATTTATTTTATAAAAGCCACTTCAGGTCATGCTTTATTGTGAATAATATATTCTCAATGTAGCACAACCAAACCAGACCATGTTTTTTGTCAACCACCCAAACACTGACAGATAAAGTTGAATGTCAATTAATAAGCTTGAACTTGATTAGGCAGCAGCTGACAGCCGTTATTGACGTGGTTCATCACTCTCTGTTTTAACTGCGCCACTTGCTCTCTCAGAACGCTCGCCGTGGACGCGAGCTCCGTGTTTTGGCTCTTCAGAGTTTTCACTTTGTCTTCCAACCGGGATATCCGCTCCAGTTTCCTCTTGCGGCATTTGGAGGCGGCGATCCGGTTACGCAGCTTCTTCCTCTCGGCCTTGATGCGCTCCTGCGTGTCCATGTCGATGGGGGAGAGCGGCGGACTGTCGCCGAAGCTCTGCATGTCCGGCACGGTCTGCGGCTCGTCCTTTAGCAGCTGCTGCTGCTGCTGCTGTTGTTGCGCGGCCATCGGGTGCGCGGGCGGCGGCGGTGGGAACGGAATGGTGTCCGTGGAATAGTTCACCGTGGTACTTCCGTACGTGCTCAAGTTCGTATACACGGGCAGGTCCGTGGGCAAAGCGAGGCTAGTGCTGCTGGTGAGTCTGTTGAGCGTCGGCGGAACGCACGGTCCACCGTTCAGCTGGTTCTGCTTGTGAAGGTCCTCCAGGGCTTTAACGAAGCCCTCCGCGAACTCCTGCTCGTCGCTTACCGACTTCGGGTAGACGAACTGGGAGGTCGGTGTGGTGGTCACCATCCCGTTGGACTGGATGATCAGCCTCTCCAGCTCCGGAGAAGCCAGCTTGAGGAGTCCCAAATCGGGTGAATTAAGAATTCCTTCAGCATCCCTCAAATCTGGCTTGAGGTTGGAGCTGTTCTGGTCGTCCAGGTTTAAACTCATGTCTTTCTTCATCATTATTCTTGATATTCCTCGGATATCCTCGTCTGGGTAAAGGCTTGTTCCCATCCTACACCCAGTGAAAGGGTGAGCTGGGCTTGCCGTCCAAACGACCCATTTAGTTGATCTTCTTGCGTATTGCGCAAAAGTATTCTTATTCCTCGAACGTTTATTTGTATTTCCTTGTCTTTCTTTTGGTGTTGTTTTACGATATTGTTCTCTCTCCTTAGCGCGAGAGGTGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327763 True 3513 lncRNA 0.40 1 93529 97041

Neighbor

gene id symbol gene type direction distance location
CI01000075_00080935_00083813 NA coding downstream 7381 80086 ~ 86148 (-)
CI01000075_00059491_00078552 UPF1, UPF1.S coding downstream 14977 59491 ~ 78552 (-)
CI01000075_00022145_00044289 NA coding downstream 49240 20947 ~ 44289 (-)
CI01000075_00142446_00146058 LOXL5B coding upstream 44726 141767 ~ 146058 (-)
CI01000075_00152252_00155011 NMRK2 coding upstream 54881 151922 ~ 155130 (-)
CI01000075_00164716_00172975 ATCAYB, ATCAY coding upstream 67320 164361 ~ 172975 (-)
CI01000075_00267234_00274802 CIB2, CIB3 coding upstream 170075 267116 ~ 274802 (-)
CI01000075_00275752_00278496 NA coding upstream 178197 275238 ~ 278542 (-)
G289003 NA non-coding downstream 77077 15536 ~ 16452 (-)
G289016 NA non-coding downstream 79897 12670 ~ 13632 (-)
G289027 NA non-coding upstream 1306 98347 ~ 98554 (-)
G289035 NA non-coding upstream 28779 125820 ~ 129301 (-)
G289072 NA non-coding upstream 132729 229770 ~ 230171 (-)
G289060 NA non-coding upstream 155844 252885 ~ 256328 (-)
G289076 NA non-coding upstream 174353 271394 ~ 273130 (-)
G289036 NA other upstream 11662 108703 ~ 114605 (-)
CI01000075_00307523_00328194 NA other upstream 223469 307523 ~ 331562 (-)
G289167 NA other upstream 673053 770094 ~ 788399 (-)
G289427 NA other upstream 1395282 1492323 ~ 1515938 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location