G289216



Basic Information


Item Value
gene id G289216
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 913686 ~ 914104 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU328018
CATCGTTACGGCACTAGGAGGCGCCAAAGTGACGTAAAATTTATTTGACATTGAATGATTCATTCAAAAGATTTGTTCAAAAACATTGATTCATCCAGTAATGAAACAAGTGAAGTAGTTGAGTGAGTCATTAAATCATTCATTCATTCAAACCCATTTTTTTTAAAAAATTAATTAAATAAATATTTTTATACTGCAGCAATTCATATTTTGTCCTCTAGTAAATAATTATACGCAATTTTGTTTAGTTGTCTGTTCAGAATCATGGGAGAATCATGATTTCTATTTGAAAGAAACAAAAAAAATCTTGATTCTCATTTTATCCAGAATCGTGCAACTCTAACACAAATTAAAATAACACATGCACGTTCATCTTCCCCTCTGCGGTAGCAATTTCTTAAAATGTTATGTATTTAGCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU328018 True 419 lncRNA 0.30 1 913686 914104

Neighbor


gene id symbol gene type direction distance location
CI01000075_00885681_00895778 RANBP3B coding downstream 17908 883956 ~ 895778 (-)
CI01000075_00749894_00757773 NA coding downstream 155131 749842 ~ 758555 (-)
CI01000075_00686719_00747700 PIEZO2 coding downstream 165986 685131 ~ 747700 (-)
CI01000075_00649702_00654404 NA coding downstream 259082 646532 ~ 654604 (-)
CI01000075_00636212_00641437 MTCL1 coding downstream 272249 635984 ~ 641437 (-)
CI01000075_00952466_00992777 CTNNBL1 coding upstream 38035 952139 ~ 992777 (-)
CI01000075_01161238_01161465 NA coding upstream 247088 1161192 ~ 1161465 (-)
CI01000075_01166008_01203828 NA coding upstream 250848 1164952 ~ 1203828 (-)
CI01000075_01206857_01230864 NA coding upstream 292753 1206857 ~ 1230864 (-)
CI01000075_01335455_01336921 SLC25A42.S, SLC25A42 coding upstream 420638 1334742 ~ 1337484 (-)
G289209 NA non-coding downstream 41003 872419 ~ 872683 (-)
G289175 NA non-coding downstream 109287 800876 ~ 804399 (-)
G289161 NA non-coding downstream 220878 692516 ~ 692808 (-)
G289155 NA non-coding downstream 236455 675289 ~ 677231 (-)
G289218 NA non-coding upstream 8472 922576 ~ 922816 (-)
G289183 NA non-coding upstream 26590 940694 ~ 941050 (-)
G289244 NA non-coding upstream 90282 1004386 ~ 1004694 (-)
G289416 NA non-coding upstream 165396 1079500 ~ 1079727 (-)
G289461 NA non-coding upstream 196232 1110336 ~ 1110699 (-)
G289167 NA other downstream 125287 770094 ~ 788399 (-)
CI01000075_00307523_00328194 NA other downstream 585369 307523 ~ 331562 (-)
CI01000075_00275752_00278496 NA other downstream 635146 275238 ~ 278542 (-)
G289036 NA other downstream 799081 108703 ~ 114605 (-)
CI01000075_00022145_00044289 NA other downstream 857922 20947 ~ 44289 (-)
G289427 NA other upstream 578219 1492323 ~ 1515938 (-)

Expression



Co-expression Network