CI01000112_03759872_03772553 (AXIN2)


Basic Information

Item Value
gene id CI01000112_03759872_03772553
gene name AXIN2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 3759803 ~ 3772982 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_03759872_03772553.mRNA
ATTTAAGAGAGAGAGGAGATTACAGCTGAGCTTCACACTGAAGGCTTTGCTGCTGGAGCTGCAAGAGCCATGAATAGGACACTAACAGATCCTATGGTCAGTAGCTTCAGAGAAGATGACCCACGTCCACCGGTCCCAGGGGAAGAGGGTGAGACGACATGCCACCATCCCAGCAAACTGGCCATGATGAGACCGAAGGATCCTGTGAAAACCATTATGGCTGATCCTCGCTGTTCCACAGCCAGGAGGGATGAGGATGGACTTGGGGAACCTGAGGGCAGTGCATCCCCAGACTCCCCTCTTGCCCGGTGGACCAAATCTTTGCATTTCCTTCTTGGGGACCAGGATGGTGCTCAACTTTTCCGGGCATATCTTGAACGTGAGAAATGTGAGGACACTTTAGATTTTTGGTTCGCCTGCAATGGTTTCAGGCAAATGGACCTCAAGGATACCAAAACGCACCGAGTTGCCAAAGCCATTTACAAGCGGTATATTGAGAACAACAGCGTTGTGGCCAAGCAGCTTAAACCTGCCACTAAGACCTTTATTAGGGATAATATTAAGCGTCAGCAGATTGACTCCGCAATGTTTGATCAGGCTCAAATGGAGATCCAGACAGCTATGGAGGAGAACGCCTATCAGATGTTCTTGACCTCAGACATATACCTTGAGTACGTCAGAACCGGGTGTGAGAACCCCAGTCATGTGAATCCCAATGGACTAGGAGGCCTAAAACTGGTGTGCGGATACTTGCCGATGCCGACTCTAAATGAAGAGGAAGAATGGAGTTGTAATGACTTTAAAGCCAAAGCTTTGGCCACTGTAGTGGGTCTGTCTGCCAAAGCGCTACGGTCACCTCCTTCCCTTCGTGCTGCGGAAGCATTGGAGAAAAGCTACAGTATATTGTCTGGGTTTAATAAAACACCAGGGGAAATCTGGTTTGATGAATTAATACCTGTCATAGCACTTGAGGTTGTAAATGAGGTGACCCATCAAGGTGTGGTGCCAGACAAATGTTTATCTGTCTCAAAGACAGCCCATTGGGAGGGTGATCTTGAAGAAGTGGAGCAGGAATGTGTCACAGCAGGAGAGAGGGGTATGGAGAGCAAGAGAGATTGGAGGGAGGGGCGGCCTGGGTCCTACAGACGGAGTGACCCTGGAAACCCTTATCGTGTTACGTCCGGTTATAGTTTTGCCCCTGCCACCAGTGCCAATGACAGCGAGGTCTCCAGTGATGCCCTGACAGATGACTCTATGTCCATGACAGACAGTAGTGTCGTGCCCCTGGGCGTCTGTTCTGGGCAAGAGTGCAGAGAAAGATCTTGCTGTTACCAGCACTCTAAAATGCTCACGGCTGACATGGAGGAAGATGAAGAACTTTGGGTTCTGGATGATATTGAAAGGAAAGTCATTAGGCTTGCGGTTTTAGTTTGCACAGGAGATGCCATCCCTCCTTACAAGCTGGGAAGTAAAAAACAATTACAGCGAGAGATGCAGCGCAACATGAGGATGAACGGCCAAGTGTCTCTACCTCCGTTTCCTAGGACGCGGCGGCCACCTAAGGAGATGACTCCCGTGGAGCCAGCAGCCTTTGCAGCACAGCTGATAGCCAGGCTGGAACGTCTGAAGCGGGAACAGGAAACCATGAGCTCCCTGGAGGAGAGACTTCAACAGATTCAGGAGGAGGAGGAACGGGATGAATCTGAGGTGTCTGGAAGCAGTGCATCCCACTCTCTGCCTTTGCTCCCTCCTGGCTCTTGTGAGGAGGACCCCCAGGCCATCCTGGACGAGCACCTTTCCCGAGTCCTCAAGACCCCTGGCTGCCAGTCTCCAGGAATGCTTCGGCATTCCCCGCGCTCCCGCTCTCCTGAACAGCGCCCGCTGCCTCGGGGAGGTCCCAGCACCAGGTCACAGTCTGGCTCTGTGAATGGATATGTGCCAGCCAAGACCTTCATCTCCAGACAGTCAACAAAGCACATCCATCACCACTACATCCATCACCACGCTGGGCCCAAAAGCAAGGAGCAGATCGAGGCGGAGGCGACCCAGCGGGTGCAGTGCCTGTGCCATGGAGCTTCAGAATGCTGCTCCGCCCCCTACATTCGCAGCCGGAGTCTGGGCAGAGACCAGTGTGGCAGCCCTGCAGAAGTGGCCTTGGGGCATTCCAGCTCTTTATCCAAGCGTTTGTGTAAATCTGGAGAGGAGGTGAACACGGAAGGGTTGGAGAGCAGTCTCCTCCAGCTGCCAGCTGACAGTACAGACCGCTCTCAAAACGTATGGCAGTGGATCCTGGAGAGTGACCGACAGACCAAGCACAAGCCCCACAGCACTCAAAATGTAAAGAAGTTGCACTGTTTGGATTCCACACGCACACACACCTGGGGAGGAGGCGGAAGCAGTGGGCATCTCCGTGCACACCAGCCCGCACACCCCTTCGTTCAGGACCCCGCCATGCCACCTCTACCCCCTCCCAACACCCTAGCACAGCTGGAAGAGGCCCGCAGACGCCTGGAGGAAGTTTCCAAACCCTCTAAACAGAGACCGAAAGATCCCAAGAAGATGTCAGGTTGCCACGGTAGTTTGGGCTCAGAGACAGTGGTCACGTACTTCTTTTGCGGTGAGGAAATCCCATACCGCCGGATGATGAAAACACACAGCCTCACACTTGGACACTTCAAGGAACAACTAAGGAAAAAAGGCAACTACAGGTACTACTTCAAGAAAGCCAGTGATGAGTTTGAGTGTGGTGCTGTGTTTGAGGAGGTCTGGGACGACTGCACAGTTCTGCCAATGTATGAGGGCAAAATCCTCGGCAAAGTGGAAAGAATGGACTAAAGGAACATGACAGCCCATATGTGGACTTACCCAGCACTCAAGACTAACTCAAAGACAGAAAATAGACATTTTATGAAGCTTAAGAAGTTTAGACGTTTGGCTTACCAAGCTATTGAAGGAATACTAGCCAATGAAGTACAGAGGGATCTGAACCAGCAATGCATCATGAGAAATTGTTCCTTTGCTTTGGAAAACTGAGAGATGTTATGACCAATGAAGATGCAGTTAACCACTTGCTTGTTTGGACTACAACATGCCAACACTGGTGTGTTACCATACCATGAACTGCTGACCAGCATTTGTGATAATTATAGATGTGTATACGTGTGTTGAATGCGAGAATGTGTGCATGTGTGATACAGAGGTGCTCATATGTACACAAAGTTATAATATGCTTCTGTCACAAGTTAAAGACTTTATTGCTATTTA

Function

symbol description
axin2 Involved in negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification. Acts upstream of or within dorsal/ventral axis specification and heart development. Predicted to be located in cytoplasm. Is expressed in several structures, including anterior neural keel; marginal blastomere; nervous system; pharyngeal arch; and pleuroperitoneal region. Used to study congenital heart disease. Human ortholog(s) of this gene implicated in colorectal cancer and endometrial adenocarcinoma. Orthologous to human AXIN2 (axin 2).

GO:

id name namespace
GO:0030154 cell differentiation biological_process

KEGG:

id description
K04385 AXIN2; axin 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_03759872_03772553.mRNA True 3264 mRNA 0.51 12 3759803 3772982

Neighbor

gene id symbol gene type direction distance location
CI01000112_03653384_03730444 NA coding upstream 29355 3653384 ~ 3730448 (+)
CI01000112_03608324_03621681 NA coding upstream 138115 3608324 ~ 3621688 (+)
CI01000112_03571702_03574425 NA coding upstream 185103 3571380 ~ 3574700 (+)
CI01000112_03344466_03359943 CYTH3, CYTH3A coding upstream 399507 3344466 ~ 3360296 (+)
CI01000112_03285278_03286531 STK19 coding upstream 473235 3284558 ~ 3286568 (+)
CI01000112_03861399_03879738 TEX2 coding downstream 88417 3861399 ~ 3879752 (+)
CI01000112_03896750_03921778 ERN1 coding downstream 123768 3896750 ~ 3923164 (+)
CI01000112_03932803_03933881 NA coding downstream 159821 3932803 ~ 3933912 (+)
CI01000112_03933921_03937412 NA coding downstream 160939 3933921 ~ 3937708 (+)
CI01000112_03956622_03957718 MAFGA, MAFGB, MAFG coding downstream 183640 3956622 ~ 3957867 (+)
G329413 NA non-coding upstream 216777 3533229 ~ 3543026 (+)
G329381 NA non-coding upstream 371352 3388250 ~ 3388451 (+)
G329380 NA non-coding upstream 372433 3387157 ~ 3387370 (+)
G329373 NA non-coding upstream 375425 3376281 ~ 3384378 (+)
G329339 NA non-coding upstream 452924 3306588 ~ 3306879 (+)
G329517 NA non-coding downstream 38552 3811534 ~ 3882944 (+)
G329513 NA non-coding downstream 86496 3859478 ~ 3926176 (+)
G329512 NA non-coding downstream 199134 3972116 ~ 3973883 (+)
G330383 NA non-coding downstream 331256 4104238 ~ 4104501 (+)
G330402 NA non-coding downstream 375537 4148519 ~ 4148864 (+)
G329194 NA other upstream 827914 2920254 ~ 2931889 (+)
G329125 NA other upstream 1141652 2617704 ~ 2618151 (+)
G328456 NA other upstream 2526685 1232022 ~ 1233118 (+)
CI01000112_05076817_05101845 NA other downstream 1311738 5076817 ~ 5101845 (+)

Expression


Co-expression Network